Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02527 ATGTGCTTCCACAACACAAAAGCCATGGCTCACTTCATGTTGCTAGCAACAATTGTAGTTGGCATTGCAATGGGAGATTCATCCAAGGACAAAGAGGAATGCACTGAGCAATTGGCAGGGCTAGCAACATGTTTGCCCTATGTTGGGGGTCAAGCACAAGCTCCAACCCCAGATTGTTGTAGTGGTCTCAAGCAAGTGCTCAAGAACAACAAAAAGTGTTTGTGTGTTATCATCAAAGATCGCAATGATCCTGACCTGGGTGGTTTGCAGATTAATGTGACTTTAGCTTTGAACCTGCCAACAGCTTGCAATTCCCCTGTCAATGTGTCCAAGTGTCCTGAGCTGCTGCACATGGATCCCAAATCACCAGATGCTCAAGTTTTCTATCAATTGGAGAAAGGCTCCAGCAAAAATGGCACAAGTCCTGCAGCAAGTCCTTCTGCTGAAGTTGGAGCAAGTCCTTCAAGCAACCAGACAGCCAGTACCCCACAGAAGAATGATGCATCCTGTAAAGAGAAGGGATTGTTTGGGCTAGGAGTTTTGGCTATAGGGCTTCAAGTTTGGGCTTTAATTGGGCTCTTCTGCTAG 588 0.4626 MCFHNTKAMAHFMLLATIVVGIAMGDSSKDKEECTEQLAGLATCLPYVGGQAQAPTPDCCSGLKQVLKNNKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPELLHMDPKSPDAQVFYQLEKGSSKNGTSPAASPSAEVGASPSSNQTASTPQKNDASCKEKGLFGLGVLAIGLQVWALIGLFC 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02527 195 Gene3D - 31 112 IPR036312 -
Pumo10g02527 195 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Pumo10g02527 195 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Pumo10g02527 195 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Pumo10g02527 195 MobiDBLite consensus disorder prediction 134 166 - -
Pumo10g02527 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 155 IPR043325 -
Pumo10g02527 195 SMART aai_6 34 112 IPR016140 -
Pumo10g02527 195 Pfam Probable lipid transfer 16 112 IPR016140 -
Pumo10g02527 195 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 112 - -
Pumo10g02527 195 CDD AAI_LTSS 41 104 - -
Pumo10g02527 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02527 Pumo-Chr10 43349734 43351135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02527 26 193 Acyl Lipid Metabolism Gene Families AT2G44300 56.742 3.25e-64 195