Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02526 ATGGGTGTGGTGGTAATCGACGGCAGCACCGTGCGCGACTTCGTGAACGACGACGCGGCCTTCACGAAGAGCGTGGACGAGCAGTTCGAGGCGCTGGACCTCAACGGCGACGGCGTCCTGTCGCGCTCGGAGCTCCGCACGGCCTTCGAGTCGATGCGCCTCATCGAGACGCACTTTGGCATCGACGTGGCCACGCCGCCGGAGCAGCTCGCCAGGCTCTACGACTCCATCTTCGACAAGTTCGACGGCGACCGGAGCGGCGCCGTCGACCGCCGCGAGTTCAGGGAGGAGATGAGGAAGATCATGCTCGCCATCGCCGACGGCCTCGGCTCCTTCCCTATCCGCATGGTCCTCGAGGACGACCCCAATAGCCTTCTCCAGAAAGCCGCGGATCTCGAAGCTTCCAAGACCTGA 414 0.6473 MGVVVIDGSTVRDFVNDDAAFTKSVDEQFEALDLNGDGVLSRSELRTAFESMRLIETHFGIDVATPPEQLARLYDSIFDKFDGDRSGAVDRREFREEMRKIMLAIADGLGSFPIRMVLEDDPNSLLQKAADLEASKT 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02526 137 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 121 - -
Pumo10g02526 137 SUPERFAMILY EF-hand 21 105 IPR011992 -
Pumo10g02526 137 Pfam EF-hand domain pair 27 99 IPR002048 GO:0005509
Pumo10g02526 137 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Pumo10g02526 137 Gene3D - 8 106 - -
Pumo10g02526 137 SMART efh_1 24 52 IPR002048 GO:0005509
Pumo10g02526 137 SMART efh_1 73 101 IPR002048 GO:0005509
Pumo10g02526 137 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Pumo10g02526 137 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Pumo10g02526 137 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02526 Pumo-Chr10 43341141 43341554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02526 1 136 EF-hand Containing Proteins AT2G44310 72.794 2.30e-68 201