Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02522 ATGTCACTTTCCCGTGGCCAAAAATTTTTCAAGAGGTTCTGTGTGGATGAATTCCAAATGGGAAGTCTTCCATATAGCAGCTTTTTGTCCAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGACTTAGAAGATGCATAATTTCCCCTTTCAATCCACGTTATAGGGCATGGGAGATGCTACTAATTGTCCTAGTTGTTTACTCTGCATGGATTTGCCCCTTTGAGTTTGCCTTTCTGCCTTACAAGCAAGACACACTGTTCATCATAGACAACATTGTCAATGCCTTCTTTGCCATTGACATCATGCTGACATTCTTTGTTGCATATCTTGATAACCATTCCTACCTTCTGGTTGATGACCCCAAGAAAATTGCAATAAGGTACATATCTACCTGGTTTATCTTTGATGTCTGCTCAACTGCACCATTTCAATCCATCAGCCTCCTCTTCACTGATCACAGCAGTGAGATTGGCTTCAAAGTTCTCAACATGCTTCGGTTGTGGCGCCTCAGACGTGTCAGTTCTCTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACCAGGTGCTCCAAGCTTATTGCTGTGACCTTGTTTGCTGTGCACTGTGCTGGATGCTTCAACTATCTGATTGCAGATAGGTACCCTGATGCCAAATCAACATGGATTGGTTCTGTGTACCCAAATTTCAAAGAAATGAGTCTTTGGGACAGATATGTCACTGCCATGTATTGGTCCATTGTCACACTTACCACCACTGGCTATGGGGACTTACATGCTGAAAACACAAGGGAGATGCTGTTTGACATATTCTACATGTTGTTCAACTTGGGATTAACCTCATACATCATTGGAAACATGACAAACTTGGTGGTCCACTGGACAAGCCGCACCAGAAATTTTAGAGACACAGTGAGAGCAGCTTCAGAATTTGCATCAAGAAATCATCTGCCCCATCACATACAGGATCAAATGTTGTCACACTTGTGTTTGAAATTCAAGACAGAAGGACTGAAGCAGCAAGAAACACTGAATGGCATGCCAAAGGCAATTCGTGCAAGCATTGCATACCATCTCTTCTTTCCTATTGTGCAGAAGGTCTACCTCTTCCAAGGAGTCTCTCAAGACTTTCTTTTCCAACTGGTTACAGAGATGGAAGCTGAGTACTTCCCACCCAAGGAAGATGTTATACTACAAAATGAGTCTCCCACAGACCTTTACATGCTGGTTTCAGGGGCAGTGGATCTCATTCGCTATGTTGATGGCCATGATCAAGTTTTGATGAAGGCTATTGCTGGAGACACATTTGGGGAGATTGGAGTGTTGTATTGTAGACCACAGCCTTTCACTGTTCGGACCACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCCTTAATGAATTCCTTACATGCATATCCAGAAGCAGCACAAATTATAATGAAAAATATCTTCATGAGCTTTAAGGGGCATGAAGGATTGGATTTTGATTATCCACCTAGTGACCCTGGAATGGCTCTTCACCAAATGCATGATTGGGACAACACAGGAGGAAGTTTTTCTGATGCATCTACAAATATCTCACATGGGGAAGCCAGATTGCATAACATGATTCCTGAGGATGGCAAAAGAGATCCTCATGCTACTTTGCACCAAGGTCATCCTGACAGGGAAGCAAATGAAAAGAACCAAAGCCCTATAAGATGGAAACAGAAGCCTCTTGTAGACCAGCAACAAAACAAGAGCATTTCTGACCTTGCAATGAACCATGAAAATAGGAAAACATTAGATGAACATATTATAGAGTTTTTGGAGCCAGAAATCCCTATCAACTACCCTTTAGGAAAAATATACACAAACTCTTATTCAAGTACCTCTAACCATAGAAATGAGAGACAAACAGAAAGATTCTTCAAAAAGAGAGTTACCATCCACTTTCTAAGCAAAGACATAACAACCTCACAGGAACAGCATGGAAAGTTGATAATCATACCTGATTCAATAGAAGAGCTGCTCCATATTGCTGGAGAAAAGTTTGGAGGCTCCAAGCCTACAAAAGTGATTAGTACAGAGAATGCAGAGATAGATGACATTAGTGTCATTCGAGATGGGGATCATCTTTTTTTTCTTTGCTGTGACAGTGAAAATTTAAGTTCATAA 2187 0.4138 MSLSRGQKFFKRFCVDEFQMGSLPYSSFLSNDLLPSLGARINQETRLRRCIISPFNPRYRAWEMLLIVLVVYSAWICPFEFAFLPYKQDTLFIIDNIVNAFFAIDIMLTFFVAYLDNHSYLLVDDPKKIAIRYISTWFIFDVCSTAPFQSISLLFTDHSSEIGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYLIADRYPDAKSTWIGSVYPNFKEMSLWDRYVTAMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQDQMLSHLCLKFKTEGLKQQETLNGMPKAIRASIAYHLFFPIVQKVYLFQGVSQDFLFQLVTEMEAEYFPPKEDVILQNESPTDLYMLVSGAVDLIRYVDGHDQVLMKAIAGDTFGEIGVLYCRPQPFTVRTTELSQILRLSRTSLMNSLHAYPEAAQIIMKNIFMSFKGHEGLDFDYPPSDPGMALHQMHDWDNTGGSFSDASTNISHGEARLHNMIPEDGKRDPHATLHQGHPDREANEKNQSPIRWKQKPLVDQQQNKSISDLAMNHENRKTLDEHIIEFLEPEIPINYPLGKIYTNSYSSTSNHRNERQTERFFKKRVTIHFLSKDITTSQEQHGKLIIIPDSIEELLHIAGEKFGGSKPTKVISTENAEIDDISVIRDGDHLFFLCCDSENLSS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02522 728 SMART cnmp_10 377 494 IPR000595 -
Pumo10g02522 728 FunFam Potassium channel KAT3 61 301 - -
Pumo10g02522 728 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo10g02522 728 MobiDBLite consensus disorder prediction 547 587 - -
Pumo10g02522 728 SUPERFAMILY cAMP-binding domain-like 304 492 IPR018490 -
Pumo10g02522 728 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Pumo10g02522 728 PANTHER POTASSIUM CHANNEL AKT1 26 498 IPR045319 GO:0005249|GO:0006813
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g02522 728 Gene3D Jelly Rolls 344 503 IPR014710 -
Pumo10g02522 728 MobiDBLite consensus disorder prediction 547 574 - -
Pumo10g02522 728 FunFam Potassium channel KAT2 365 501 - -
Pumo10g02522 728 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Pumo10g02522 728 CDD CAP_ED 377 490 IPR000595 -
Pumo10g02522 728 ProSiteProfiles KHA domain profile. 650 728 IPR021789 -
Pumo10g02522 728 Pfam KHA, dimerisation domain of potassium ion channel 649 718 IPR021789 -
Pumo10g02522 728 Gene3D - 60 300 - -
Pumo10g02522 728 Pfam Cyclic nucleotide-binding domain 397 477 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02522 Pumo-Chr10 43213744 43220495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02522 1 718 Ion Channels AT5G46240 62.293 0.0 910
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02522 10 43213744 43220495 Pumo10g02522 10 43213744 43220495 ECH