Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02502 ATGAACGCACCCATCATTGACCCGTTGCAGGGAGATTTTCCAGAAGTGATAGAGGAGTATTTGGAACATGGGTGTATGAAATGTATTGCCTTCAATCGTCGTGGCACACTTCTTGCTGCTGGGTGCAATGACGGAAGTTGCGTTATCTGGGATTTTGAAACCCGGGGCATTGCTAAAGAGCTACGAGATAATGAATGTATGTCTCCAATAACCAGTGTCTGTTGGTCAAAGTGTGGTAATCGAATTCTTGTATCTGCTGCTGACAAGTCATTGTCACTGTGGGATGTTATGAGCGGTAAGAGGATAACGAGAATAGTTTTACAACAAACCCCTCTACAAGCTCGTCTTCATCCGGGTTCATCTAAGCCATCTCTTTGCTTGGCATGCCCTCTCTCATGTGCTCCAATGATTGTTGACTTGAACACAGGAAACACAACTTCGCTTAAAGTTTCTATCTCAGAGATATCCAATAATGGACCAACCCCTGCCTCACGTAACAAGTGCGCTGATGGAATTACCTCCTTCTCACCAACTGCTGCATGTTTTAGTAAGTATGGCAACCTGGTTTATGTGGGAAATTCGAAAGGGGAAATTCTTGTAATTAACCATATAGATGGTGAGGTGCGTGCCATGGTTCCTATCCCTGGTGGTTCTGTAGTGAAGAACATGGTGTTTAGCAGGAATGGACAGTATCTTCTAACAAACTCAAATGATCGAATAATCAGGATCTATGAAAATCTTCTACCACTAAAAGATGAAGTTAGAGCACTTGATGACCTAAATGAGAACCTCAATGATCTAAATGGTGTTGAGAAGTTGAAAGCTGTAGGATCAAAATGCCTATCTTTGTTCCGGGAGTTTCAAGATTCAATCACGAAGGTGCATTGGAAAGCACCCTGCTTCAGTGGTGATGGTGAGTGGGTTGTGGGTGGTTCTGCTAGTAAAGGAGAGCACAAGATTTACATATGGGATAGAGTTGGGCATCTTGTGAAGATCCTTGAAGGACCTAAGGAAGCCCTTATCGATTTAGCTTGGCATCCTGTACATCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTATATCTGGGCTAAAGATTACACCGAGAATTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTCGAGGAAAACGAGGAGTATGTGGAGCGAGAAGATGAGTTTGATTTGATTCCCGAGACTGAGAAGGTAAAAGGATCTGATGTTAATGAAGATGATGAAGTTGACATTGTAACGGTGGAGAAAGATCCTGCTTTCAGTGACTCTGATATGTCTGAAGAAGAGTTATGTTTCCTGCCAGCAACTCCCAGTTGCGATGCTCCTGAACAAACAGACAAGTTCGTAGAAAGTTCTTCAAAGTTGGTGGACAGCAATAACTCTGGATCCCCACTTTCAGAAGAGGCTGGACCAAATGAACATACCATGAATCATAACTCAAGTCCAGTTGAAGATGATGCTGGGGGAACACGGATTAAAAGAAAGCGGAAACCTTCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAATGAAGAAACCCTCAAAATCTAGCAAATAA 1575 0.4273 MNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGCNDGSCVIWDFETRGIAKELRDNECMSPITSVCWSKCGNRILVSAADKSLSLWDVMSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSCAPMIVDLNTGNTTSLKVSISEISNNGPTPASRNKCADGITSFSPTAACFSKYGNLVYVGNSKGEILVINHIDGEVRAMVPIPGGSVVKNMVFSRNGQYLLTNSNDRIIRIYENLLPLKDEVRALDDLNENLNDLNGVEKLKAVGSKCLSLFREFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRVGHLVKILEGPKEALIDLAWHPVHPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVNEDDEVDIVTVEKDPAFSDSDMSEEELCFLPATPSCDAPEQTDKFVESSSKLVDSNNSGSPLSEEAGPNEHTMNHNSSPVEDDAGGTRIKRKRKPSEKVLELQAEKMKKPSKSSK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02502 524 Coils Coil 250 270 - -
Pumo10g02502 524 FunFam Compass component swd1 164 424 - -
Pumo10g02502 524 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 5 510 IPR037850 GO:0048188
Pumo10g02502 524 ProSiteProfiles Trp-Asp (WD) repeats profile. 70 104 IPR001680 GO:0005515
Pumo10g02502 524 ProSitePatterns Trp-Asp (WD) repeats signature. 38 52 IPR019775 -
Pumo10g02502 524 SMART WD40_4 13 51 IPR001680 GO:0005515
Pumo10g02502 524 SMART WD40_4 326 365 IPR001680 GO:0005515
Pumo10g02502 524 SMART WD40_4 277 324 IPR001680 GO:0005515
Pumo10g02502 524 SMART WD40_4 162 202 IPR001680 GO:0005515
Pumo10g02502 524 SMART WD40_4 205 245 IPR001680 GO:0005515
Pumo10g02502 524 SMART WD40_4 54 95 IPR001680 GO:0005515
Pumo10g02502 524 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Pumo10g02502 524 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Pumo10g02502 524 Pfam WD domain, G-beta repeat 280 324 IPR001680 GO:0005515
Pumo10g02502 524 Gene3D - 137 382 IPR015943 GO:0005515
Pumo10g02502 524 Gene3D - 19 132 IPR015943 GO:0005515
Pumo10g02502 524 MobiDBLite consensus disorder prediction 441 524 - -
Pumo10g02502 524 MobiDBLite consensus disorder prediction 451 490 - -
Pumo10g02502 524 MobiDBLite consensus disorder prediction 493 524 - -
Pumo10g02502 524 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Pumo10g02502 524 SUPERFAMILY WD40 repeat-like 23 364 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02502 Pumo-Chr10 42446351 42450407 Dispersed/Wgd