Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02493 ATGGCACCAAAACCAGTTTCCCTTTCACATTTACTCCTTTTAATCTTGTTTCTTGCCACCACCATCCAACTTTCAGAGCAGTTAGAGTTTTCACAGTCCCAAACACTTCTCAAGGTTCAGCAACTTCTTGGCTATCCATCAACACTAGGCACTCTCAGCAGCACCACCACAGACTTTTGCAACATTGAACCTACCCCATATTTGACACTAGTCTGCTATGAGGATAGCTTGACACAGCTGCATGTTGTTGGCAACAATGAGTACACTCCACTGCCTCAAAACTTCTCCTCAGACACTCTATTTGCTACACTAGGCACTCTATCAAGCTTGAAAGTCCTCTCCTTGGTTTCTCTTGGACTCTGGGGGCCCTTACCTGAAAGCATTGCTCAAATGTCTTCATTGGAAATACTTAACATTAGCTCAAATCACTTCAATGGAGCCATCCCTTCTCAGCTTTCACTTCTGAGGAACCTTCAGTCAGTGGTGCTTGATGATAACAGCTTCTATGGTGAAATTCCCAACTGGATAGGCTCACTTCAAGGTTTGGCTGTGCTTAGTATGAAGAACAACTGGTTTAGTGGGAGCCTGCCTACTTCATTGGATGCTCTTCATACCTTGAGGGTGTTGGATCTATCAAATAATCAGTTATCTGGGGAACTTCCTCACCTTAAGAATTTGGCAAACCTTCAAGTTCTTAACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCTCTCCCCACTAAGTTAGTTTCCCTTGTGCTTAGAAATAACAGCTTCAGGTTAAGTGTCCCTTCTGATTTAAGTTCTTTCTATCTGCTCCAAAGGCTAGACCTTTCATTGAATGGTTTTGTGGGGCGATTTCCACCATCCTTATTGTCATTGCCTTCCATCAATTACCTTGACATTTCCTCAAATAAATTCACTGGGATGCTTTTCAATGACATGTCATGCAATGATGATCTCCACTTTGTAAATTTGTCTTCAAATCTTCTGAAAGGGGAACTTCCCACTTGCTTAGAACCAAAGAACAGGGTTGTTCTGTATGCTAGAAACTGCTTATCAAATAAGGACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCAGTGACAATCATACCTCATCAACAGAAGCACAAGAGAACAACTAGTAAAGCAATTATTGTATCAAGTATGGGAGGTATTGTTGGTGGAGTGCTGATTTTAGGAGTGGTTATCCTGGTTGTTAGCCGAGTTCATAAGAAACAAGTTGTGAAAATACCTTCAAAGTCCACTTTGGAGCATGTTATCAGCCAGGTAGATAATGAAGATGAAGTGAAAACTACTACAAGGTCCATAATGGAGCATATCATCAAAAGGGTTCCTGACAAACGTGCTGTGGAAACACTAACAAGATCCATAAAGGACCATGTCATGAGCCGAGTTAATAACAAGCGTGTTGTGAGGGCATCGACAAGGTCCATAATAGAACATGTATCATCAGTAAACACGGCAAAACTACTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCCGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAAGCTACAAATAATTTTGATGAATCATGTTTCATAAGTGAAGGCCCGCATGGTCAGATTTATAAAGGGGTGCTCTCTGATGGAATGCACATTGCTATTAGAGGTTTGAAAATGAGAAAGAGACATGGCCCTCAGACTTACATGCACCAAGTTGAGTTGATTTCAAAACTAAGGCATTCACACTTGGTTAGTGCACTTGGGCATGCTTTTGAGTGCAACCAAGAAGATTCAAGTGTAAACAATGTATATTTCATATTTGAGTTTGTTCCAAATAGAAGTTTAAGAAGCTGTGTTTCTGGATCTTCTGGGGAAAAGCTTTCTTGGACTCAGAGAATAACAGCTGCAATTGGAGTGGTGAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTGTATTCAAATAATCCGAAGATAACAGATATTCTTTTGGATAACAATCACAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTGCTGAAAATAAAAGAATGATCAGCAATGGAACTTCCCCTGGCTTAAAAGGAAATGTCCAAGCAAGGATCAAGGATGCAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTCTTACAGGTAAGCATCAAAACTGATGACATAGCTAGAAGGAGTATTGTTGACCCTGCAGTTCACAAGGAATGTTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCTGGTGACCCAACTGAAAGGCCTTCTGTGGAAGATATTCTCTGGAATTTGCAGTTTGCAGCACAGGTTCAGAATTCATGGAGAAGAGACTCAAGTGATCACAGTTACTAG 2490 0.4072 MAPKPVSLSHLLLLILFLATTIQLSEQLEFSQSQTLLKVQQLLGYPSTLGTLSSTTTDFCNIEPTPYLTLVCYEDSLTQLHVVGNNEYTPLPQNFSSDTLFATLGTLSSLKVLSLVSLGLWGPLPESIAQMSSLEILNISSNHFNGAIPSQLSLLRNLQSVVLDDNSFYGEIPNWIGSLQGLAVLSMKNNWFSGSLPTSLDALHTLRVLDLSNNQLSGELPHLKNLANLQVLNLENNTFGPHFPSLPTKLVSLVLRNNSFRLSVPSDLSSFYLLQRLDLSLNGFVGRFPPSLLSLPSINYLDISSNKFTGMLFNDMSCNDDLHFVNLSSNLLKGELPTCLEPKNRVVLYARNCLSNKDQDQHPSDFCSNEALAVTIIPHQQKHKRTTSKAIIVSSMGGIVGGVLILGVVILVVSRVHKKQVVKIPSKSTLEHVISQVDNEDEVKTTTRSIMEHIIKRVPDKRAVETLTRSIKDHVMSRVNNKRVVRASTRSIIEHVSSVNTAKLLTDARYISETMKMGARLPAYRTFALDELKEATNNFDESCFISEGPHGQIYKGVLSDGMHIAIRGLKMRKRHGPQTYMHQVELISKLRHSHLVSALGHAFECNQEDSSVNNVYFIFEFVPNRSLRSCVSGSSGEKLSWTQRITAAIGVVKGIQFLHTGIVPGLYSNNPKITDILLDNNHNVKISSYNLPLSAENKRMISNGTSPGLKGNVQARIKDADKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLQVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSGDPTERPSVEDILWNLQFAAQVQNSWRRDSSDHSY 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02493 829 Gene3D Ribonuclease Inhibitor 153 245 IPR032675 -
Pumo10g02493 829 ProSiteProfiles Protein kinase domain profile. 539 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02493 829 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 513 621 - -
Pumo10g02493 829 Pfam Leucine Rich repeats (2 copies) 205 237 IPR025875 -
Pumo10g02493 829 FunFam probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 153 246 - -
Pumo10g02493 829 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 109 819 - -
Pumo10g02493 829 Gene3D Ribonuclease Inhibitor 31 152 IPR032675 -
Pumo10g02493 829 SUPERFAMILY L domain-like 104 354 - -
Pumo10g02493 829 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 248 372 - -
Pumo10g02493 829 SUPERFAMILY Protein kinase-like (PK-like) 519 812 IPR011009 -
Pumo10g02493 829 Gene3D Transferase(Phosphotransferase) domain 1 622 828 - -
Pumo10g02493 829 Gene3D Phosphorylase Kinase; domain 1 500 612 - -
Pumo10g02493 829 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 622 826 - -
Pumo10g02493 829 Pfam Protein kinase domain 545 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02493 829 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Pumo10g02493 829 Gene3D Ribonuclease Inhibitor 246 357 IPR032675 -
Pumo10g02493 829 FunFam probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 31 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02493 Pumo-Chr10 42024227 42030250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02493 475 828 Miscellaneous Gene Families AT3G03770 58.939 3.36e-136 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo10g02493 Pkinase 4.2e-15 CL0016