Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02190 ATGAGGGGTGGGAGGAGGAGTATGATAAAGCTTCAGTTTAGCAAGATCTACTCATTTGCTTGTGGTAGAACAATCTTCAAGAGAGAACATTCAAGGATTGGGGGACATGGTCATTCCAGGGTGGTTTTCTGCAATGAACCAGATAGGTCTGAGGGAGGGGTTTTCAATTATGCTGATAATTCTGTTAGGTCCACAAAGTATACTGTTGCCACTTTCTTGCCTAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCCAATTTCTATTTCTTGGTTGCTGGCATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATCCTTCCTCTGTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATTGAAGATTGGCGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCATAAAGGTGATGGCATTTTCGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGGCTGGATGTAACTTCTTCGTTACAGGAGGACTTCAAATTCCGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATTTGTATTCATTTGTTGGGAGCATGGAGTTTGGAGAGCAAAAATATCCTCTTTCTGCACAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAATACAGACTACGTGTTTGGAGCAGTCATCTTTACTGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCCCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATTCTCTTTGGCATTGCAACCAAAGGTGACCTCAACAATGGGTTAATGAAAAGATGGTATCTAAGACCAGATAGTTCCACAATTTTCTTTGATCCAAAAAGAGCAGCTGCAGCTGCTATATTTCATTCTTTAACAGCCTTGATGTTATACAACTTCTTCATTCCTATCTCCTTGTATTTCTCAATAGAGATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCTGACAAACCAGCTCGTGCCCGTACTTCAAACTTGAACGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCAGGGGTAGCTTATGGCTGCGGTGTGACAGAGGTTGAGCAAGTCATGGGCAGAAGTAATGGTTCACCTATTTTTCATGAGCATATTAATGGATTAGAATCAAAATCAAATGAAATCAGGGACTCTCCTGATAGAAAAGAACCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTTATGCAGATGTTATACAGAAATTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCGGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAATTGGTTTTAAATTCTACAAAAGGACTCAGACTTGTTTGTCAATATATGAGTTGGATCCAGTTTCTGGCAATGAAGTTGAAAGGACGTACAAGCTTCTTAATGTTTTAGAATTCAATAGCTCGAGGAAGCGAATGTCGGTGATAGTGAAAGATGAAGAAGGGAGAATTTTTCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGAAGTTTGAAGAGAAAACTCTGGAACATGTGCGTGAATATGCTGATGCAGGTCTAAGGACCCTAGTACTTGCCTATTGCGAACTTGATGAAGAAGAATACAAGGAGTTTGATGATAAATTTTCTGAAGTAAAAAATTCAGTTGCCGCAGATCGGGAAACCCTGATTGAAGAAGTATCGGATAAGATTGAGAGGAATCTAATCATTCTGGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTAGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTAGAAAAGGTTGGAGACAAGATGGCTATTGCCAAGGCATCAAGGGAAAGTGTGCATCATCAGATATCTGAAGCTGCTCAACTGCTTTCTGCATCCAGAGGGACCTGCCAGACATTTGCTCTAATAATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATTTGAAGAACATGTTTCTAGAGCTTGCAAGTCATTGTGCGTCAGTTATCTGCTGTCGCTCATCGCCAAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATGTAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTACAAGAATATCACATTTGGCTTCACTCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCATCACTTCCTGTGATTGCCCTTGGGGTCCTTGATCAGGATGTATCTGCCAGGTACTGCCTGAAGTTTCCTATTCTATACCAAGAAGGTGTGCAAAATGTCCTCTTTAGCTGGCATCTAATACTTAGCTGGATGCTTAATGGATTTATTAGTGCCACAATGATATTCTTCTTCTGCACAAAAGCAATTGAGCCTCAGGCCTTTGATGAGGAGGGAAGAACTGCTGGAAGGGATATGCTGGGCGTGACGATGTACACTTGCGTGGTCTGGGTTGTGAACTTGCAGATGGCACTTGCTATACGTTACTTCACCTTGATACAACATATTTTCATCTGGGGTTCCATTGCTTACTGGTATCTTTTCCTCCTGGCATATGGAGCAATGCCTCCAAAGATTTCTACAAATGTTTACAAAGTCTTCATTGAAACTCTCGCCCCGTCTCCTTCCTATTGGGTTGTGACATTCTTTGTGGCGATCTCAACACTTATACCATACATCTCATGCTCGGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTACAGTGGATAAGGTATGAGAGGATGACAAATGGTCCTGAATAA 3504 0.4055 MRGGRRSMIKLQFSKIYSFACGRTIFKREHSRIGGHGHSRVVFCNEPDRSEGGVFNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGIFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKFRDFRAVIKCEDPNANLYSFVGSMEFGEQKYPLSAQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGIATKGDLNNGLMKRWYLRPDSSTIFFDPKRAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGCGVTEVEQVMGRSNGSPIFHEHINGLESKSNEIRDSPDRKEPIKGFNFTDERIMNGNWVNEPYADVIQKFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAREIGFKFYKRTQTCLSIYELDPVSGNEVERTYKLLNVLEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKNGRKFEEKTLEHVREYADAGLRTLVLAYCELDEEEYKEFDDKFSEVKNSVAADRETLIEEVSDKIERNLIILGATAVEDKLQNGVVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKVGDKMAIAKASRESVHHQISEAAQLLSASRGTCQTFALIIDGKSLTYALEDNLKNMFLELASHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNVLFSWHLILSWMLNGFISATMIFFFCTKAIEPQAFDEEGRTAGRDMLGVTMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIAYWYLFLLAYGAMPPKISTNVYKVFIETLAPSPSYWVVTFFVAISTLIPYISCSVIQMWFFPMYHQMVQWIRYERMTNGPE 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02190 1167 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Pumo10g02190 1167 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Pumo10g02190 1167 Gene3D - 113 289 - -
Pumo10g02190 1167 FunFam Phospholipid-transporting ATPase 118 288 - -
Pumo10g02190 1167 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Pumo10g02190 1167 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Pumo10g02190 1167 Pfam Cation transport ATPase (P-type) 537 631 - -
Pumo10g02190 1167 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1148 IPR032630 -
Pumo10g02190 1167 SFLD Haloacid Dehalogenase 410 921 - -
Pumo10g02190 1167 FunFam Phospholipid-transporting ATPase 705 910 - -
Pumo10g02190 1167 CDD P-type_ATPase_APLT_Dnf-like 59 1030 - -
Pumo10g02190 1167 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1148 IPR023298 -
Pumo10g02190 1167 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1158 - -
Pumo10g02190 1167 FunFam Phospholipid-transporting ATPase 547 705 - -
Pumo10g02190 1167 SUPERFAMILY HAD-like 421 925 IPR036412 -
Pumo10g02190 1167 NCBIfam phospholipid-translocating P-type ATPase 57 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo10g02190 1167 Gene3D - 701 910 IPR023214 -
Pumo10g02190 1167 NCBIfam HAD-IC family P-type ATPase 842 952 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo10g02190 1167 SFLD p-type atpase 410 921 IPR044492 -
Pumo10g02190 1167 SUPERFAMILY Calcium ATPase, transduction domain A 144 285 IPR008250 -
Pumo10g02190 1167 Gene3D - 551 679 IPR023299 GO:0000166
Pumo10g02190 1167 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 673 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02190 Pumo-Chr10 29711603 29722245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02190 3 1167 Primary Pumps ATPases AT1G68710 72.315 0.0 1810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02190 10 29711603 29722245 Pumo10g02190 10 29711603 29722245 ECH