Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01392 ATGTACGAGTCTTGGCTGGTAAGACATGGCAAGGCATACAATGCACTGGGAGAGAAAGAAAGGCGGTTTGAGATTTTCAAGGATAATTTGAGGTTCATTGATGAGCATAACATGATGGAGGGTCGCACTTACAAGTTGGGGTTGAACAAATTTACTGATTTGACCAATGAGGAGTATAGGGCTATGTACTTGGGTACCAAAATAAATAGAACCGTTGGTTTGCTTTCTAGTTGCAGAAAGAGCGACCGTTATGCCTTCAGGGCGTTTGACAAATTACCCGACTCTGTGGATTGGAGAGAGAAAGGTGCAGTGAATCCTGTTGTTAAAGATCAGGGCCAATGTGGGAGTTGCTGGGCATTCTCAACTGTTGGTGCTGTAGAGGGGATTAACCAAATTGTAACAGATAAAATGATCTCTTTGTCGGAACAAGAGCTGGTGGATTGTGACAAATCATACAACCAAGGTTGCAATGGAGGTCTAATGGACCATGCTTTTGAATTTATCATTAAAAATGGAGGGATTGACACGGAAGATGACTACTCCTACAAAGCACGTGAAGGTTCATGCGACCCTAACAAGAAAAACGCTCATGTGGTGACCATTGATGGATATGAAGATGTTCCAGAAAATGATGAGAGTTCCTTGAAGAAGGCAGTGGCAAACCAGCCAGTCAGTGTTGCCATTGAAGCAGGTGGCAGAGCTTTCCAGTTGTATCAGTCGGGTGTTTTTACTGGTGAATGCGGAACTCAACTCGACCACGGTGTAGTGGCTGTTGGGTACGGAACTGAAAATGGCAAAGATTACTGGCTTGTGAGGAACTCATGGGGTCCCAACTGGGGAGAAAATGGTTACATCAAGATGGAGCGTAATGTGGCTGCTAAAACTGGAAAGTGTGGTATTGCTATGGTGGCTTCATATCCAACCAAGAAGGGTCCAAATCCTCCTAATCCTGGTCCTACTCCTCCTCCTCCTTCATCTCCTGTAAAACCTTCTACTGTCTGTGATGATTACTACTCTTGCCCCTCTGGAAGCACTTGCTGCTGTGCATATCCATATGGCGACTTTTGTTTCGGATGGGGATGCTGCCCACTTGAGTCTGCAACTTGCTGTGATGATCACTACAGCTGTTGTCCTCATGAGTATCCTGTCTGCGATATTGAAGCCGGAACCTGC 1173 0.4544 MYESWLVRHGKAYNALGEKERRFEIFKDNLRFIDEHNMMEGRTYKLGLNKFTDLTNEEYRAMYLGTKINRTVGLLSSCRKSDRYAFRAFDKLPDSVDWREKGAVNPVVKDQGQCGSCWAFSTVGAVEGINQIVTDKMISLSEQELVDCDKSYNQGCNGGLMDHAFEFIIKNGGIDTEDDYSYKAREGSCDPNKKNAHVVTIDGYEDVPENDESSLKKAVANQPVSVAIEAGGRAFQLYQSGVFTGECGTQLDHGVVAVGYGTENGKDYWLVRNSWGPNWGENGYIKMERNVAAKTGKCGIAMVASYPTKKGPNPPNPGPTPPPPSSPVKPSTVCDDYYSCPSGSTCCCAYPYGDFCFGWGCCPLESATCCDDHYSCCPHEYPVCDIEAGTC 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01392 391 SMART Inhibitor_I29_2 2 59 IPR013201 -
Pte9g01392 391 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 111 122 IPR000169 -
Pte9g01392 391 Gene3D Granulin 331 391 IPR037277 -
Pte9g01392 391 SUPERFAMILY Cysteine proteinases 1 308 IPR038765 -
Pte9g01392 391 Pfam Papain family cysteine protease 92 308 IPR000668 GO:0006508|GO:0008234
Pte9g01392 391 FunFam Cysteine protease 1 1 310 - -
Pte9g01392 391 Pfam Cathepsin propeptide inhibitor domain (I29) 2 59 IPR013201 -
Pte9g01392 391 Pfam Granulin 345 391 IPR000118 -
Pte9g01392 391 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 268 287 IPR025661 -
Pte9g01392 391 PRINTS Papain cysteine protease (C1) family signature 253 263 IPR000668 GO:0006508|GO:0008234
Pte9g01392 391 PRINTS Papain cysteine protease (C1) family signature 111 126 IPR000668 GO:0006508|GO:0008234
Pte9g01392 391 PRINTS Papain cysteine protease (C1) family signature 268 274 IPR000668 GO:0006508|GO:0008234
Pte9g01392 391 FunFam Cysteine protease 1 331 391 - -
Pte9g01392 391 Gene3D Cysteine proteinases 1 310 - -
Pte9g01392 391 SMART GRAN_2 334 391 IPR000118 -
Pte9g01392 391 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 251 261 IPR025660 -
Pte9g01392 391 SUPERFAMILY Granulin repeat 332 365 - -
Pte9g01392 391 SMART pept_c1 92 308 IPR000668 GO:0006508|GO:0008234
Pte9g01392 391 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 2 306 IPR013128 GO:0008234
Pte9g01392 391 CDD Peptidase_C1A 93 307 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01392 Pte-Chr9 35182044 35184138 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01392 9 35182044 35184138 Pte9g01392 9 35182044 35184138 RCT