Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00630 ATGCAAGCATATAATGTTCTTTGTGCTTCTCAAGTGAGATTCAGGTTGCTCCTAAAGGTTGAGGATGCTGACAATATTGAAGCTCTAAGGAATTCTTTAAGCAGTATTCCTTGTAGCAAGGTGGAAAAGCCAACCCAATGTGAAACAAAAAGTGATGCTAAGCCATTGAAAACCACTATTTCAAGGATAAGCCCATCTGCAAAATTGCTAATAACAGAATATGGACTAGATGCATCATCCCTTAATGCTTCTGGTCCTCGTGGTACATTACTCAAAGCTGACGTTCTTGAGGCTATCAAGTCAGGGAAAGTATCTTCAAAGCTTTCTTCCTCTAAGGAGAAGACATTGCCATCGTCTCAACCCCATGTACGATCTTCTGCTTCACAAGAGAAAGGATCTGAGGAAGTTGGATTTGAAGATTTGCCTAACAGCCAGATCCGAAAATATCATGTTAAAGTTTATGTGAACGATATAGTCATCAAAGTTGTGGCTGCTGCACTCAGGAATGTTCCAGAGGCAAATGGTACCAGGAATGCTGAGAAAACCATATCATCAATCTCTGCCGAGCATCACCAACTACGACCTTGCTTCTTCCTTCCCGCAGCATTCAAACTTGGGAATGTTTCCGGTGCACCAATTCTGTGCTATCGACAGCCTGAAACCCCTCAGTCTTTCCCCAACCCTCATTTCTTCTTCTCATCTTCTCGATTCTTCTCCTCTCCAGAAGCCATTCTCGCAGCCTCCACTCTAGATGTTCCAGAAGTCATTTTCGCAGCCTCCACTCTCGATGTTCCAGAAGCCGTTGTCCACAACTCGCAGGTTGCAGACTTGCAGCCTCCTTCCTTCTTCTCTCAAACCCTCTGGTTTCTGCTTCCCTCTTCTGTGTCTTCTCCATCTGCTCCTTGCGTCTTGCTTCTTACTTCCTGCGTCTGCGTCTTCTCGTCTTCTCCATCTTCTGCGTCTTCTCGTCTTCGTCTGTCTTGCTTTTGTCGTCTGTCTTGCTTCTCCATTTTCGTTCGGTCGTCTGCGTCTTCTCGTCTTCTCCATCTTCTCTGTCTTGCTTCTCCTTCGTCTGACTTGCTTCTGTCTGTGACTCTGTTGTCTTCTGCTGTCCTCTGTCTTCCTCTGTGGATGCAGATATCGTTGCTGGCTTGCTCACCGTCACAATCCGGAACTCAGATCAACTGTCCTCTGTCTTCCTCCCAAACTTCGTTGTTGTCCTCTGTCTTCACTGTCCCAGATATTATCTGTGCTTCTGGGTTACCGTTGTTTGGGGTTAATTTTGTTTAG 1290 0.4566 MQAYNVLCASQVRFRLLLKVEDADNIEALRNSLSSIPCSKVEKPTQCETKSDAKPLKTTISRISPSAKLLITEYGLDASSLNASGPRGTLLKADVLEAIKSGKVSSKLSSSKEKTLPSSQPHVRSSASQEKGSEEVGFEDLPNSQIRKYHVKVYVNDIVIKVVAAALRNVPEANGTRNAEKTISSISAEHHQLRPCFFLPAAFKLGNVSGAPILCYRQPETPQSFPNPHFFFSSSRFFSSPEAILAASTLDVPEVIFAASTLDVPEAVVHNSQVADLQPPSFFSQTLWFLLPSSVSSPSAPCVLLLTSCVCVFSSSPSSASSRLRLSCFCRLSCFSIFVRSSASSRLLHLLCLASPSSDLLLSVTLLSSAVLCLPLWMQISLLACSPSQSGTQINCPLSSSQTSLLSSVFTVPDIICASGLPLFGVNFV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00630 429 Pfam e3 binding domain 62 96 IPR004167 GO:0016746
Pte9g00630 429 Gene3D - 62 103 IPR036625 GO:0016746
Pte9g00630 429 MobiDBLite consensus disorder prediction 107 132 - -
Pte9g00630 429 MobiDBLite consensus disorder prediction 107 137 - -
Pte9g00630 429 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 62 99 IPR004167 GO:0016746
Pte9g00630 429 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 61 101 IPR036625 GO:0016746
Pte9g00630 429 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 17 149 IPR045257 GO:0006086|GO:0045254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00630 Pte-Chr9 10332203 10335350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00630 11 180 Acyl Lipid Metabolism Gene Families AT3G13930 26.522 6.97e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00630 9 10332203 10335350 Pte9g00630 9 10332203 10335350 RCT