Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00116 ATGGAGAGAGAGTACCAAAGTTCTACTCTGCAATCACCACTAGTATATGTCTCTGACGAAAACATATCTAAACTAGATGAGGGACACATAAGAAATGGAGGAGGGATCGCAAGGAAGGAAGTCTTCGAAGAAGTGAGGAAGCAGTTATGCCTTGCAGGTCCTTTGGTATTCGTTGGCTTGTTGCAATATTCACTACAGGTTATCTCTGTTATGTTTGTCGGTCACCTTGGAGAATCAGCTCTCTCTGGTGCTTCCATGGCCACTTCTTTTGCATCAGTTACTGGTAACAGCTTAATGATTGGTATGTCCAGTGCATTAGACACCTTGTGTGGTCAGTCATATGGAGCAAAGCAATATCGTATGCTAGGTATTCATATGCAGACATCTATGATAGTGCTTTTGATTGTCAGTGTACCTCTTGCTATTATCTGGGCAAATACAAGAAACATTCTAAGTGGTCTAGGACAAGATCCTGAAATATCAATTGAAGCAGGAGGTTATGCTCGTTTCATGATACCTAGCATTTTTGCTTATGCAATTCTACAAAGCCTTAATAGGTTCTTACAGACACAAAATATTGTAATCCCAATGATGTTATGCTCTGGCTTCACAACTTTGCTGCACATCCTAACTTGCTGGCTTATGGTGTATAAATCTGGACTTGGGATCAGAGGAGCTGCAGTAGCAAATTCTATATCTTATTGGAATAATGTGATCTTGTTAGCACTTTACGTCAAATTCTCGCCTTCATGTGCAAAAACTTGGACAGGCTTTTCATTAGAGTCCTTTCACAATATTCCCACATTTCTAAGGCTTGCAATTCCTTCGGCTGTCATGGTCTGTTTGGAAATGTGGTCTTTTGAAATGATGGTTCTTCTATCTGGTCTCCTCCCAAATCCAAAGTTGGAAACTTCAGTGCTTTCAATCTGCTTGAACACAAATTCAATGGCCTGGATGATCCCCTATGGACTCAGTGGTGCTGTAAGCACTCGTGTCTCGAATGAACTAGGAGCTGGGCATCCACGACTTGCACGTTTAGCTGTTTGTGTTGTCTTTGTCATGGCCATCACTGTGGGTATCGTGGTTGGGACAGTGATGATACTGGTACGATATTTGTGGGGATACGCTTACAGCAACGTACCAGAAGTAGTGAGATATGTAGGAAACATGATGCCAATTCTCGCACTGTCCAACGTCTTAGATGGACTGCAGTGTGTGCTTTCAGGCACTGCTAGAGGGTGCGGGTGGCAGAAAATGGCTGCCTATGTCAACCTTTGTTCATATTATTTGGTGGGGATTCCATGTGCTGCTTTATTAGCCTTTCTTGTTCATATGGGTGGCAAGGGACTTTGGCTTGGAATTATATGCGCACTTGGGGTGCAAGTGCTTTCTCTTCTTATCATCACCATTCGGACTGACTGGGATGAACAAGCGAAGCAGGCTACAGAGAGAGTTTATGAATCAATTTTACCTGCAGAGCAAGTACGATAG 1491 0.4286 MEREYQSSTLQSPLVYVSDENISKLDEGHIRNGGGIARKEVFEEVRKQLCLAGPLVFVGLLQYSLQVISVMFVGHLGESALSGASMATSFASVTGNSLMIGMSSALDTLCGQSYGAKQYRMLGIHMQTSMIVLLIVSVPLAIIWANTRNILSGLGQDPEISIEAGGYARFMIPSIFAYAILQSLNRFLQTQNIVIPMMLCSGFTTLLHILTCWLMVYKSGLGIRGAAVANSISYWNNVILLALYVKFSPSCAKTWTGFSLESFHNIPTFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTNSMAWMIPYGLSGAVSTRVSNELGAGHPRLARLAVCVVFVMAITVGIVVGTVMILVRYLWGYAYSNVPEVVRYVGNMMPILALSNVLDGLQCVLSGTARGCGWQKMAAYVNLCSYYLVGIPCAALLAFLVHMGGKGLWLGIICALGVQVLSLLIITIRTDWDEQAKQATERVYESILPAEQVR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00116 496 CDD MATE_eukaryotic 44 480 IPR045069 GO:0042910|GO:1990961
Pte9g00116 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 474 - -
Pte9g00116 496 Coils Coil 492 496 - -
Pte9g00116 496 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte9g00116 496 Pfam MatE 275 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte9g00116 496 NCBIfam MATE family efflux transporter 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00116 Pte-Chr9 1332067 1335644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00116 9 1332067 1335644 Pte9g00116 9 1332067 1335644 RCT