Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00951 ATGTTTACAACAACAGATAGGGGGCATGACCAAATATTGCAGCACCCCACTAAGCCATTTGTGATGATGGATAGAAGGTGGAAGCCTAATATTGAGATAGCTCCCAATTGTCCTCGTTGTGCATCTGCCAACACCAAATTTTGTTACTACAACAACTATAGCTTGTCACAACCAAGATATTTCTGTAAGGGGTGTAGGAGGTATTGGACTAAAGGCGGTTCTCTACGGAACGTGCCTGTTGGTGGTGGTTGCCGTAAGAGCCGCCGTGGGAGATTGGCAAGGAGTGGACAAAATCAAAGGGTTTCCGGCAATGGGTTCAATTCTAAGCGATCTGCGGTTCCTAACGGAGAGTCATTGCTTGCAGAAGAAGCAAATGAAACTACTGAGATTGATCTGGCAGCTGTTTTTGCCAGATTCTTGAACCAAAATCCAAGTTCTGTCGAAGAATTTGACAGCGAGCCACATGGGTCGTCATCAAACTTCTCAAATTCTCTTACACCAGAGAGTTTTGAGAATGAGATCAGTGACACCGTTCTTGATTGTCAGAAGCAGTCTGATCCTAACCTACTCATGGAGTACGATTTGCCAGTACAAGAATTTCTCCAAGATGAGAAGATTGATAATTTTGTGGTGTCAGATGATGGTTTATACACAATTGATCAGCTGCAGGATTTGTTGCGTGGTGATGAGTTGGTCCAAGATGTTCTTTTGTATGAGTCCGATACAGCAGCATCCTCATGTGGAAACTTCACATGGCAGCCATCACCATCATTACAGCAGGTGCCAGTTCCAGCGATTCAATTGCAACAAGAGATGGAGTACTTATTGCCAATCAATCATGAAGATGATTACAACTCTCACGTTCATTCTACAATGAGCATGTTGAACGATAATTGGGGTTCCTTCGATCTCTCAACCTTTTGA 924 0.4351 MFTTTDRGHDQILQHPTKPFVMMDRRWKPNIEIAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRGRLARSGQNQRVSGNGFNSKRSAVPNGESLLAEEANETTEIDLAAVFARFLNQNPSSVEEFDSEPHGSSSNFSNSLTPESFENEISDTVLDCQKQSDPNLLMEYDLPVQEFLQDEKIDNFVVSDDGLYTIDQLQDLLRGDELVQDVLLYESDTAASSCGNFTWQPSPSLQQVPVPAIQLQQEMEYLLPINHEDDYNSHVHSTMSMLNDNWGSFDLSTF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00951 307 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pte8g00951 307 MobiDBLite consensus disorder prediction 86 113 - -
Pte8g00951 307 MobiDBLite consensus disorder prediction 146 167 - -
Pte8g00951 307 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pte8g00951 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 165 IPR045174 GO:0003700|GO:0006355
Pte8g00951 307 Pfam Dof domain, zinc finger 35 89 IPR003851 GO:0003677|GO:0006355
Pte8g00951 307 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00951 Pte-Chr8 33601389 33602312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00951 27 144 C2C2-Dof Transcription Factor Family AT3G52440 60.656 2.66e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte8g00951 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00951 - - qsa:O6P43_015057 243.047