Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00598 ATGGAGAACTGCAGAGACAACATGATAGTACTCAAAGCGGGATTGGAGAGTACAGAAAAGTTTAACATCATATCAAAAGATGATGGGGTGCCATTAGTAGCCTTCTCTTTGAAAAACCGCAGCCATTATGATGAGTTTCAAGTGTCCGACATGTTAAGGCGTTATGGTTGGATTGTGCCTGCATACACCATGCCTCCTGATGCACAACATATAACTGTGCTTCGTGTTGTGATCAGGGAAGACTTCTCCCGCACCCTTGCAGATCGTCTTGTGCATGACATTGTAAAAGTGTTGCACGAGCTGGAAGTACTGCCAGCTAAGCTGCATGCAGCTAGGGTTTCCATTTCTGATGGAGATGAGGGTAAGGATGGCTCAGTAGTTGTGAAGAAGAGTGCTCTTGAAACGACTAGAGAAATCACTACAGCTTGGAGGAAGTTTGTCATGGACAGGAAAAAGATGAATGGTGTTTGTTAG 474 0.4451 MENCRDNMIVLKAGLESTEKFNIISKDDGVPLVAFSLKNRSHYDEFQVSDMLRRYGWIVPAYTMPPDAQHITVLRVVIREDFSRTLADRLVHDIVKVLHELEVLPAKLHAARVSISDGDEGKDGSVVVKKSALETTREITTAWRKFVMDRKKMNGVC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00598 157 PANTHER GLUTAMATE DECARBOXYLASE 1 157 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte8g00598 157 SUPERFAMILY PLP-dependent transferases 1 101 IPR015424 -
Pte8g00598 157 Gene3D - 18 105 - -
Pte8g00598 157 FunFam Glutamate decarboxylase 18 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00598 Pte-Chr8 28493235 28493708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00598 1 158 Calmodulin-binding Proteins AT1G65960 65.823 1.82e-68 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00598 8 28493235 28493708 Pte8g00598 8 28493235 28493708 RCT