Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00597 ATGGTTCTCTCCAAGACCGCTAATAAGAGTGATATCTCTGTTCACTCCACATTTGCATCACGTTATGTCCGAACAGCATTACCCAGGTTTAAGATACCAGACGACTCGATTCCCAAGGAGGCTGCGTTTCAGATCATAAACGACGAGCTCATGCTTGATGGGAATCCAAGGTTGAACCTGGCGTCCTTCGTGACTACATGGATGGAGCCTGAATGTGATAAGCTCATCATGGCAGCCATTAACAAGAACTACGTTGATATGGATGAATATCCTGTCACCACTGAACTTCAGAATCGCTGTGTGAACATGATTGCTCATCTCTTCAATGCACCACTGGAGGAATCAGAGACAGCAATTGGTGTTGGAACTGTTGGCTCATCAGAAGCCATCATGTTAGCTGGATTAGCCTTCAAAAGAAGATGGCAAAACAAGAGAAGAGCAGAAGGCAAACCTACTGATAATCCAAACATTGTCACCGGAGCCAATGTCCAGGTTTGCTGGGAAAAATTTGCAAGGTATTTTGAGGTGGAACTGAAGGAGGTCAAGCTAAGTGAAGGATTCTATGTTTTGGACCCAGAGAAAGCAGTGGAAATGGTTGACGAGAACACAATATGTGTTGCTGCAATCCTTGGTTCAACACTCAATGGAGAATTCGAAGATGTCAAGAAATTGAATGACCTATTGACGGAGAAAAACAAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCATTCATTTATCCAGACCTCGAGTGGGACTTCCGTTTGCCATTGGTGAAGAGTATCAATGTCAGTGGCCACAAGTATGGTCTTGTCTATGCTGGAATTGGTTGGATCATTTGGAGGACCAAGGAGGATTTACCTGAGGAACTTATCTTCCATATCAACTATCTTGGAGCTGATCAACCTACCTTCACGCTGAACTTCTCCAAAGGTAATAATAACTTCACATACTACCTAATTATCTCACAGAAGAAGAAATTATTTAATAATGAAATCAATGAATTTTCTTCATTGGTAAACCATGCAATGCAGGATCTAGTCAAGTTATTGCTCAGTACTACCAGCTCATTCGCTTGGGTTTTGAGGTGA 1119 0.4281 MVLSKTANKSDISVHSTFASRYVRTALPRFKIPDDSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAIGVGTVGSSEAIMLAGLAFKRRWQNKRRAEGKPTDNPNIVTGANVQVCWEKFARYFEVELKEVKLSEGFYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKKLNDLLTEKNKETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWIIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGNNNFTYYLIISQKKKLFNNEINEFSSLVNHAMQDLVKLLLSTTSSFAWVLR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00597 372 Gene3D - 1 65 - -
Pte8g00597 372 FunFam Glutamate decarboxylase 66 360 - -
Pte8g00597 372 FunFam Glutamate decarboxylase 1 65 - -
Pte8g00597 372 NCBIfam glutamate decarboxylase 16 341 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte8g00597 372 PANTHER GLUTAMATE DECARBOXYLASE 1 353 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte8g00597 372 Gene3D - 66 360 IPR015421 GO:0003824
Pte8g00597 372 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 353 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte8g00597 372 SUPERFAMILY PLP-dependent transferases 15 321 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00597 Pte-Chr8 28489182 28493133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00597 1 340 Calmodulin-binding Proteins AT5G17330 86.257 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00597 8 28489182 28493133 Pte8g00597 8 28489182 28493133 RCT