Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01093 ATGGAAGGGTTAGCTCCAACCAGTTCATGCCAGAGGCCTATGTCAGCTGAGAAGAAGACAAGGCCACAGGAGCAGTTGAACTGTCCAAGATGCAATTCTACCAACACTAAATTCTGCTACTACAACAACTATAGTCTCACACAGCCTAGGTACTTCTGCAAAACTTGCAGAAGGTATTGGACTGAAGGTGGGTCTCTCAGGAATGTTCCAGTTGGAGGTGGTTCCAGAAAAAACAAAAAAGTCATGATAAGTGCTTCAACGTCATCTTCCTCAACACCAAAGATTCCTGATCTAAACCCACCAAGCTGCCTCCCAAATTCACAAAACGCCAAGTCTCATGGAGGTCAAGATCTTAATCTAGCATTCCCAGTTATAGAGAACTATCATGGTGGAATGTCCCAATATGTTGAGGTCCCAAAACTAGAAAACAGTCACAGTGTTCACCACCATCATCGAAACTCTTCCCCCACTTCAGCTTTGGAGTTGCTTAGGTCTGGAATGGCAACTGGGGGTTTGAACCCTTATATTCCAACACTGATGCCAGGCTCAAATACACTCTACTCATCTGGGTTTCCACCACAGGAACTGAAACCTCACTTGGATTTTTCTGTCGACCACGGGATAGGAAGCACTTACGCTATACAAGAAAATAATGGAAGGCATGTGTTTCCTTTTGGAGAAATGAATCATCACCTCTCAGCTTCTAATGAAGTACAACAGCATAAAGAACAACCTAATTCACTTGGTTATTGGAATGGAGTCATGGGTGAAGGCTCATGGTAA 783 0.4381 MEGLAPTSSCQRPMSAEKKTRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVMISASTSSSSTPKIPDLNPPSCLPNSQNAKSHGGQDLNLAFPVIENYHGGMSQYVEVPKLENSHSVHHHHRNSSPTSALELLRSGMATGGLNPYIPTLMPGSNTLYSSGFPPQELKPHLDFSVDHGIGSTYAIQENNGRHVFPFGEMNHHLSASNEVQQHKEQPNSLGYWNGVMGEGSW* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01093 260 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 165 IPR045174 GO:0003700|GO:0006355
Pte7g01093 260 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Pte7g01093 260 MobiDBLite consensus disorder prediction 1 27 - -
Pte7g01093 260 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Pte7g01093 260 MobiDBLite consensus disorder prediction 8 27 - -
Pte7g01093 260 MobiDBLite consensus disorder prediction 67 100 - -
Pte7g01093 260 MobiDBLite consensus disorder prediction 80 100 - -
Pte7g01093 260 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01093 Pte-Chr7 35477090 35478472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01093 18 261 C2C2-Dof Transcription Factor Family AT3G61850 50.916 2.89e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte7g01093 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01093 - - gmx:778110 315.464