Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00674 ATGGTTTTCCCACCCATCAATCCAGTCTATCTAGATCCACCCAACTGGGCACAGCAAACTAATCAGCTACAAGGAGTGAGCAGTAGTACTGTTGAGAACCCTCAGTTTCCAACATTTCTGCAGCCACCTTCAGCTGATGGATCTAGTGGAGTTAGCCATGGTTCAGTGAGGCCAGGCTCATCAATGGTTGATCGAGCCAAGCTTGCAAAGCTTCCTCAGCCAGAAGGATCACTCAAATGCCCAAGATGTGAATCAACAAACACTAAGTTTTGTTACTACAATAATTACAGTCTATCACAACCTCGTCACTTTTGCAAGACTTGTCGGCGTTACTGGACTAGTGGAGGTGCACTGAGAAATGTTCCAGTTGGAGGTGGGTGTAGAAGGAACAAAAGGAGCAGCAGAAAAAGCAGTAGATCAAAATCTCCATCTACGATACAGCCTCATCAAGCTGCTTCAGCCTTCACCAGATCTAACTCTTCAACCATTTGCACCCAAGATGGTACGATGAACCATTTACCACGGCATACACCATCACAGCTTCAATTGTCATGTCTGTCTCCTTTTCAGAACATTTCTGATTACGTGACTGGAGACATGCAATTAAGTTTTGGTTCAACTAGAGCTCCAATGGCAGCGGCCAGCGGAAAAACTGGTGGCGGTAATGTCAACTTTCAGAATGGCAGCGATAGTAGACCAATATTGTCAAATATTTTTACAGAGGTATGGAGGTCACCACAGATGGAGCAAGTGTATGATCGATTGTCTCAGCAACAGCTGCCTATTTTGTCTAACATTCTTGAACCTTCCATTAGTTTACTTCCTTATGAAGGCGGAAATATTGAGCCACCAAGATTTGTCGAAATGGGTAGTTATCTTCGGTTTAATAAGGCGTTGGATTTGAGTGCTAGTGGAATTCCTCAGCAAGCTATGGTTAAATCGGAAGAAAACCGAACATTGGATTTGTCAAAGAGTAATGCTTTCTTAGGCGGTTCATCTGCAAGTGATCATCAAGTATGGATTGGCAGCAACTCGTGGACTGATCTTCCTGGTTTCACAGGCTCTACCAGCCATCTTTTGTGA 1083 0.4404 MVFPPINPVYLDPPNWAQQTNQLQGVSSSTVENPQFPTFLQPPSADGSSGVSHGSVRPGSSMVDRAKLAKLPQPEGSLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTSGGALRNVPVGGGCRRNKRSSRKSSRSKSPSTIQPHQAASAFTRSNSSTICTQDGTMNHLPRHTPSQLQLSCLSPFQNISDYVTGDMQLSFGSTRAPMAAASGKTGGGNVNFQNGSDSRPILSNIFTEVWRSPQMEQVYDRLSQQQLPILSNILEPSISLLPYEGGNIEPPRFVEMGSYLRFNKALDLSASGIPQQAMVKSEENRTLDLSKSNAFLGGSSASDHQVWIGSNSWTDLPGFTGSTSHLL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00674 360 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Pte7g00674 360 MobiDBLite consensus disorder prediction 139 159 - -
Pte7g00674 360 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Pte7g00674 360 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Pte7g00674 360 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 68 207 IPR045174 GO:0003700|GO:0006355
Pte7g00674 360 MobiDBLite consensus disorder prediction 122 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00674 Pte-Chr7 24760085 24761449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00674 9 359 C2C2-Dof Transcription Factor Family AT3G55370 36.486 2.73e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte7g00674 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00674 - - qsu:112038371 300.827