Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01202 ATGGATCCTTCAACCGGACTACTTCAGGAAATTTCTAGTCATTCACTGGAAAACATGCTTTGTTCAAATGCTCAACAAGATAGAAAGCCAAGGCCACAACCAGAACAAGCTTTGAAGTGCCCTAGATGTGATTCCACAAACACCAAATTCTGCTACTACAACAATTACAGCCTTTCTCAGCCAAGATACTTCTGCAAGTCTTGCAGAAGGTACTGGACCAAAGGAGGAACACTTAGGAACGTGCCAGTTGGTGGAGGCTGCAGGAAGAACAAGAGATCATCATCATCATCTGCATCATCCAAGAGGCCCCAAGATCAACCATTTACACCAAATCCTAACCTACTCAATGGCCTCCCAGCATTGTCTTACGACTCCAATGACCTAACACTTGCAATAGCTAGGCTCCAAAACCAGTCGAATGGGCAGATGGGGTATGATGGACACGACTTTTCTGTTATTGGAAATCCCTCCCCAGCTCACTGTGACATTATTGGCAACCATGGTTTCGTTGATGCAATTAGGAGTGGATTCCTAGAGAATCAGAATAACCTTCAGAGTCTTTACTATGGATATCGAAATGGGGAGTTTGAGAATGGTAATAGTGGGACTGCTGGGGTTAGTGAGGAAATGATGCTTGCTCATTATGATAAGGAAATGAGTAATGCAACAAGTCAAGCTGTCACAGTCAAGCAAGAGTTGTGCAGTGCAAGAGAACAGCAAAGTGACAATCGGGTCTTGTGGGGTTTCCCTTGGCAGTTCAACGGGGAAGGTAATATTGCCGACTTTGATTCAGGAAGAGGCAGCTGGAATAGTTTCAATTCTTCTTGGCATGGTCTTCTTAACAGTCCTCTAATGTAG 858 0.4429 MDPSTGLLQEISSHSLENMLCSNAQQDRKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSASSKRPQDQPFTPNPNLLNGLPALSYDSNDLTLAIARLQNQSNGQMGYDGHDFSVIGNPSPAHCDIIGNHGFVDAIRSGFLENQNNLQSLYYGYRNGEFENGNSGTAGVSEEMMLAHYDKEMSNATSQAVTVKQELCSAREQQSDNRVLWGFPWQFNGEGNIADFDSGRGSWNSFNSSWHGLLNSPLM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01202 285 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Pte6g01202 285 MobiDBLite consensus disorder prediction 83 116 - -
Pte6g01202 285 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Pte6g01202 285 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 237 IPR045174 GO:0003700|GO:0006355
Pte6g01202 285 MobiDBLite consensus disorder prediction 89 116 - -
Pte6g01202 285 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01202 Pte-Chr6 30237004 30239094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01202 1 286 C2C2-Dof Transcription Factor Family AT2G28510 40.190 9.48e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte6g01202 zf-Dof 5.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01202 - - gmx:100799737 389.808