Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01167 ATGGTTTTCTCGTCGATTCCAGTCTATTTACGTGCACCCAATTGGCAGCAGCAACCGATTCAGAATGTTGGAGAGCATTACAGAATCGATAACCCTCATCAGTTGCTTCATCAGCCACTACCTCCAGAAGCACACCATGTTGCAGGTGGTGTTGCAGGCCCATGCAAACCAGGTTCCATGTCTGATCGAGCTCGCCAAGCCAATATTCCACAACCAGAGGCTGGTCTGAAGTGTCCAAGGTGTGAATCCACCAACACTAAGTTTTGTTACTTCAACAACTACAGCCTCTCTCAGCCACGCCACTTTTGCAAGGCATGCCGGCGGTACTGGACAAGAGGAGGTGCCCTTAGAAACGTCCCGGTTGGAGGAGGCAGCCGTAGAAACAAGAAAAACAAAAGGAGTCGTTCCAAATCTCCGGCAGCCACTGATGACAGACATGCCATCTCTAACCCCGATGGCGAGAATATTGTCTCACGCAGCTATCCAAGTGATTTAATTATGAGTCAGTTGCCGCAACCATCTCAGTTGCCTCTGATGACATCTTTGCAAAATATCAACAGCCGCTATGGAGTTGGGAACGTGGGAGCTCAAATCCAAATACATGCTGATCCGTCAGGGTTTCATTTGGGAAATGCTTCTAGTACTGTAGACCAACAGTGGCGTTTCCCTTTCTCGCTCTCTACAACTTTCGAGTCACCTGCTTCAATCGGTACTTCTTACCAATTTCAAAGCCATCATACTGTTGAAACACCGCCTGCTTTGGCTTTAGTCGGAGATAACCCACTGGGGACTCTGACATCAAGTTCTACTGTTACTACTACTAGGGCAACGACTCACTTGCCACCAGCCAAGTACGAAGACCATCGAGCGATAAACTTGGCAACATCATCGCTTCCATCTTTCCCAGCAAATGGTAATCAGTACTGGGGTATTGGAAATTCATGGACAGATATGTCAGCTCTCAACTCTTCTTCCACTGGCCATCTCTTATGA 993 0.4783 MVFSSIPVYLRAPNWQQQPIQNVGEHYRIDNPHQLLHQPLPPEAHHVAGGVAGPCKPGSMSDRARQANIPQPEAGLKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGSRRNKKNKRSRSKSPAATDDRHAISNPDGENIVSRSYPSDLIMSQLPQPSQLPLMTSLQNINSRYGVGNVGAQIQIHADPSGFHLGNASSTVDQQWRFPFSLSTTFESPASIGTSYQFQSHHTVETPPALALVGDNPLGTLTSSSTVTTTRATTHLPPAKYEDHRAINLATSSLPSFPANGNQYWGIGNSWTDMSALNSSSTGHLL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01167 330 MobiDBLite consensus disorder prediction 136 150 - -
Pte6g01167 330 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Pte6g01167 330 MobiDBLite consensus disorder prediction 117 155 - -
Pte6g01167 330 Pfam Dof domain, zinc finger 76 130 IPR003851 GO:0003677|GO:0006355
Pte6g01167 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 66 215 IPR045174 GO:0003700|GO:0006355
Pte6g01167 330 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01167 Pte-Chr6 29822810 29825208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01167 1 237 C2C2-Dof Transcription Factor Family AT2G37590 42.007 7.65e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte6g01167 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01167 - - pcin:129314695 268.855