Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01182 ATGGAGGGTGAAGGAAGGAACGACTTGATTCGAGGACTGCAAAATCAAAACCAAGAGCAGCAGCTGCATCCGCCTCATAGATGTCCTCGCTGTAATTCTATGAACACCAAGTTCTGCTACTTCAACAACTACAACCAGTCTCAGCCTCGCTATTTCTGCAAGGCATGTAGAAGGTACTGGACCCAAGGCGGAACCTTGAGGAATGTACCATTTGGTGGTGGCTGCCGCAGGGGAAGGCGTGCCAGAGTAGCTGCATCTTCTGGAGAAGCTGTGAGATCACTGCCTGCAACACCAGTAGCACCAGCCCTACAGCAGCTCGCATCAGCTCCACTGCAGCCAGTACAGTTGCAGCCAAATCTGACATCAGCCCCACCAAATGTTGTTCCTTTAAATCATGTTCCTGGTGTCAGAGAATCAGGATCCATGGTTCCTACTTTGGCTATGCCTCCACTAATGACCCCCTATTATCATGGACCTGCCGTTGATGATGGAGGATATCTGTCTTCCTTGCTATCAAATAACAAGTCTCTGAACATGGGAGCTGCAGGAACCTCTAACTTCAGTGCCATGCCTGGCGTCAATATCAACTCTTTCAGCTATCAGCAACAGCAGCGCCAGATTCAACCACAGCCGTTATACCAGATGAGCAACTGGGAGAGGAACATTAGTGCTATGTATCAGAGACAACGTGGTTTAACTCAATCTGGCATGCCTGCCGGTGGTTCTGCTTATCAGCCTTATTGGTCACAGAACTTCATGAATGATGCTAACCACTGTGGTTCCGTTTCTGATGCCTCTGTGCCGAATTCAGTGAACACAACTTCCATGAATGCCAATCCAGATGGCAGTAGTGCTGCCGGGTCTTCTTTGGTCCCTAATCAATGGCCTAAGATGCCAGAATATGACCCTTCTCCCTGA 918 0.4913 MEGEGRNDLIRGLQNQNQEQQLHPPHRCPRCNSMNTKFCYFNNYNQSQPRYFCKACRRYWTQGGTLRNVPFGGGCRRGRRARVAASSGEAVRSLPATPVAPALQQLASAPLQPVQLQPNLTSAPPNVVPLNHVPGVRESGSMVPTLAMPPLMTPYYHGPAVDDGGYLSSLLSNNKSLNMGAAGTSNFSAMPGVNINSFSYQQQQRQIQPQPLYQMSNWERNISAMYQRQRGLTQSGMPAGGSAYQPYWSQNFMNDANHCGSVSDASVPNSVNTTSMNANPDGSSAAGSSLVPNQWPKMPEYDPSP* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01182 305 MobiDBLite consensus disorder prediction 270 291 - -
Pte5g01182 305 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Pte5g01182 305 Pfam Dof domain, zinc finger 26 79 IPR003851 GO:0003677|GO:0006355
Pte5g01182 305 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Pte5g01182 305 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 203 IPR045174 GO:0003700|GO:0006355
Pte5g01182 305 MobiDBLite consensus disorder prediction 270 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01182 Pte-Chr5 33353997 33355922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01182 27 98 C2C2-Dof Transcription Factor Family AT5G60200 66.667 1.76e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte5g01182 zf-Dof 2.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01182 - - qsu:112029439 183.341