Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00350 ATGATAAATGGTGATGATTTTTACTATATCCTAGAGGCATTTGTTCCCTTGTACATGGCCTTGGCAACAGGTTATGCTTCTGTTCGTTGGTGGAAGATATTCACAGCCGAGCAATGCTCCGGAATCAGCCGATTTGTGTCACATTTTGCCATGCCATTGCTTTCTTTCAAACTCATATCTTCCAGTAATCCATATGCCATGAACTTCAAGTTCATCGCTGCAGATTTGCTCCAGAAACTCTCGGTTCTCGTCGTGCTCTTTGTCTGGAAAAGCTTGAGCAGCAAAGGCAGCCTTGAGTGGGTCATCACTCTCTTCTCACTTGCATGTGTCCCAAATACTCTCGTCATTGGGCTTCCTCTCCTCAAGGCCATGTATGGGGACCTCTCAGCTAGTCTGATCGTTCAGATTATGGTTTGTCAGGGTGTGTTATGGAGAACTGTCTTACTTGTCATGTTCGAATACAGAGGAGCAATGCTCTTCATCGCTCAGAAATTTGGAAACACCGCCGCAGGCTCCATCACTTCCTTTCAACTTGATTCCGATGTCATTTCACTCAATCCTCACGATCCATCATTGCAGGCCAATGCTGAGATTCTCAGCAAGGGGGAGCTCCATGTGACGGTTAGGAAATCGACTGCCTCATCAACAGTTGATAAATACCATCATGCTGTGGATACTCAAAGCCAAAAGGTTCCCACAAATAATCCTATTGCGGTGGAGATTTATTCTTTGCCATCTTCGAAAGAGCTGGCGTCCTCTCGAGCTTCGAGCTTCGGTAAGATAGACCTTTTGAAGGCGAATGGTAATTCCCGAGCTGGAACTCAACAAACAGAAACTGCAACTTCATCCCCTACAGATCTAGATGAAAAGATGCAGAACGTTGGAATGAGGAGCCTGGAAAGATCTAGAGCTAGTCCCAATAAAGATCAGCAGCCTCACATGTTCGTGTGGAGCTCAAATACAAGTGCAGGAGCTTCTCATCCAATGCCTTCTAGAGACAACTTGGTGATCAAGGATGCAAAAAACAACACAAGTACTGTCTCCTCCGATTTTGGGATGGTAATGATCAAGCCTACTTGCAGGATTTCTGCTATACAACCCCAAAACAGCTCTCCAAAAGTCGTGACATCATATGCTGAAAAATTTTTGGAAGAGAGAGTGGACGAAAGTAGAGCTCAAACGCAAGTACCTCCAGTGAGGATCATGTCCAAATTCGTGCTTATCATAGTGTGGAGGAAGCTCATCAGAAATTCCAACACATACGCAAGCCTATTTGCACTTGCATGGTCTGTCGTGTCCTTCAGATGGGACACCAAAATGTCGAAGATTATTCAAGGATCCATCTTACTTCTATCCAATACAGGTCTAGGATTGGCCCTTTTCAGTCTAGGTCAATTCATGGCATTACAGCCAAAGATTATATCATGTGGAAAATATATGCTGCCATTATCGATGGCAGTTAAGTTTGTAATAGGGCCAGCAGTGATGGCTGCAACCTCTGCATTCCTTGGTCTTCACGGGGTTCTTTTACAGATCGCAATTGTTCAGGCAGCTCTGCCACCCGCTCTGATTTCCTTTGTCCTGGCCCAGGAGTACCACTTGCATGTAGACTTGCTTAGCACTTCGGTCATAATGGGTATGGTACTTGCGTTACCCGTTTCGCTGCTTTACCATGTGATCTTGGCACTCTAG 1692 0.4521 MINGDDFYYILEAFVPLYMALATGYASVRWWKIFTAEQCSGISRFVSHFAMPLLSFKLISSSNPYAMNFKFIAADLLQKLSVLVVLFVWKSLSSKGSLEWVITLFSLACVPNTLVIGLPLLKAMYGDLSASLIVQIMVCQGVLWRTVLLVMFEYRGAMLFIAQKFGNTAAGSITSFQLDSDVISLNPHDPSLQANAEILSKGELHVTVRKSTASSTVDKYHHAVDTQSQKVPTNNPIAVEIYSLPSSKELASSRASSFGKIDLLKANGNSRAGTQQTETATSSPTDLDEKMQNVGMRSLERSRASPNKDQQPHMFVWSSNTSAGASHPMPSRDNLVIKDAKNNTSTVSSDFGMVMIKPTCRISAIQPQNSSPKVVTSYAEKFLEERVDESRAQTQVPPVRIMSKFVLIIVWRKLIRNSNTYASLFALAWSVVSFRWDTKMSKIIQGSILLLSNTGLGLALFSLGQFMALQPKIISCGKYMLPLSMAVKFVIGPAVMAATSAFLGLHGVLLQIAIVQAALPPALISFVLAQEYHLHVDLLSTSVIMGMVLALPVSLLYHVILAL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00350 563 MobiDBLite consensus disorder prediction 269 290 - -
Pte3g00350 563 NCBIfam auxin efflux carrier 1 562 IPR014024 -
Pte3g00350 563 Pfam Membrane transport protein 10 557 IPR004776 GO:0016020|GO:0055085
Pte3g00350 563 MobiDBLite consensus disorder prediction 269 289 - -
Pte3g00350 563 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00350 Pte-Chr3 2881700 2884115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00350 1 564 Organic Solute Cotransporters AT1G23080 41.614 1.33e-155 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00350 3 2881700 2884115 Pte3g00350 3 2881700 2884115 RCT