Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00334 ATGGAGGAGTGTGCAAGAAAATACCGAGGTTTATTTAAGTTGTCAATGTGTGGTAAACAAGAGGTAGAGCAATTGTCAAGGGAAGGAAGTCATTACAGTCTATCCACCGGGATACTGCCTTCCCTGGGAGGAAGGAGTAACAGGAGAGTCAAGCTCAGGAGCTTCATTGTTTCGCCTTACGACCGCCGCTACAGTATATGGCAGACTTCTCTGATTATTTTGGTCATCTATACGGCTTGGGTTTCGCCCTTTGAATTTGGATTTCTTCAAAAACCAACTGGGGTGCTGTCAATTGCTGATAATGTTGTAAATGGATTCTTTGCTGTGGATATTGTTCTTACATTTTTCGTAGCTTACGTTGATAAAGCTACGTACTTGTTGGTTGACAATCGTAAGAAGATTGCCTGGAAATATGCCACTTCATGGTTGGCTTTTGATGTCATTTCCACTATTCCTTCAGAGCTTGCTAGGAAGATTTCCCCATCGCCTCTCAATTCATATGGCTTGTTCAATATGCTACGCCTTTGGCGTCTGCGAAGAGTTAGTGCATTATTCTCTAGGCTGGAGAAAGACAAGAATTACAATTATTTCTGGGTTCGTTGTGCTAAGCTTATCTGTGTTACACTTTTTGCAGTTCACTGTGCTGGGTGCTTTTATTACCTTCTTGCTGCACGGTATCATGATCCCAGAAAGACTTGGATTGGAGCATCTATGGGCAATTTCCTGGAGCAAAGTTTGTGGATTCGTTATGTGACTTCGATGTATTGGTCAATAACTACTTTAACAACTGTTGGATATGGAGATCTCCACCCAGTGAATACTAGGGAGATGGTGTTTGACATCATATACATGCTTTTCAATCTGGGGTTGACAGCTTATTTGATTGGTAATATGACAAACTTGGTTGTCCATGGGACCAGTAGAACAAGGCAATTTAGGGACACCATACAAGCAGCTTCTAGTTTCGCTCAGAGGAATCAATTGCCTGTTCGTTTGCAAGACCAGATGCTGGCACATCTGTGTTTGAAATTCAGGACAGACTCTGAGGGACTGCAGCAGCAAGAGACTCTTGATTCCCTTCCTAAAGCCATCCGATCAAGCATTTCACACTATCTATTTTACTCTCTTGTCGACAAGGTTTACTTGTTCAATGGGGTGTCAAATGACTTGCTTTTCCAGTTGGTCTCAGAGATGAAAGCTGAGTACTTTCCTCCCAGAGAGGATGTCATCCTGCAAAATGAAGCTCCTACAGATTTTTATGTTCTGGTCACTGGTGCAGTGGATTTGATTGTTATGAAAAATGGAGTGGAACAGGTTATTGGAGAGGCCAAAACTGGTGAACTATGTGGAGAGATCGGAGTACTTTGTTATAGGCCACAGCTCTTTACAGTGCGAACAAAGCGGCTAAGCCAATTACTAAGGCTGAATCGTACCACCTTTTTGAATATTGTTCAAGCCAATTTTGGGGATGGGACCATCATCATGAATAATCTTCTTGAGCATTTAAAAAATCTCAACGACCCTATTATGGAGGGAGTTTTAGTGGAGACAGAGAACATGCTGGCTCGTGGTAGAATGGACCTTCCTCTTAGTCTATGTTTTGCAGCACTTAGAGAAGATGACATGTTGATGCATCAGTTGCTGAAACGAGGGCTTGATCCGAATGAATCAGATAACAACGGGAGGACAGCTTTGCATATAGCAGTATCGAAAGGAATTGAAAACTGCGTACTGCTTCTATTGGATTATGGGGCCGATCCAAACATTAGAGATGCAGATGGTAATGTGCCTTTATGGGAGGCTATACTAGGTGGTTATGAATCAATCATCAAGCTATTGATAGATAATGGTGCGAAGTTAAGTACTGGAGATGTGGGACAATTTGCTTGCACTGCTGTTGAACAAAACAACTTGCATTTACTCAAGCTGATACTCCGTTATGGAGGAGACATCACACTCCCCAAAGCCAAAGGCAGCACTGCTCTTCATGTTGCAGTTTCAGAAGGAAATATTGCTATGGTAAACTATCTTTTGGATCAAGGTGCAGATATAGACAAATCAGATGCTGATGGCTGGACCCCGAGGGAGCTAGCCGACCAACAAGGACATGACGACATCATTGAACTTTTCCAATCCAAAGGGGATCGAAAATCCCATTCTGTCGTCTCAGTTTCTGAGAAGCAAGGCAGGAAGCGGCACCTAGAGAGATTTACAAGTGAGCCTGCTATGCGTTTATCATCCAGAGATGGCTCAACATTCTTAGAAGCTACAACAGATGTATCATGGGGCCGGCACCGTCCAAGGCGCAGGGGCAATGACTTTCATAACTCTCTATTTGGGATTATGTCCACAGCTCACAGAGAGGAGAAGGACTTGTTATTTGGTCACACAAGAAGTCCAATGATAAGCCCTGCAGGAAACCCTGCTAGGATAACAGTCAGTTGTCCTGAGAAAGGTGACATGGCCGGGAAGCTTGTGTTCCTCCCAGGTAGCTTCCAGGAGCTGCTCGAGATTGGGTTTAAGAAATTTGGTGTAACTCCAACAATGGTTCTAAGCAAAAGTGGAGCTCAAGTTGAAGATATAGAAGTAATTAGAGATGATGATCATCTTGTATTTGTTATTGATGATGAAACGAGACAAGCTTCTCTCCCAAATGGCGAGCGTTTGTAG 2670 0.4318 MEECARKYRGLFKLSMCGKQEVEQLSREGSHYSLSTGILPSLGGRSNRRVKLRSFIVSPYDRRYSIWQTSLIILVIYTAWVSPFEFGFLQKPTGVLSIADNVVNGFFAVDIVLTFFVAYVDKATYLLVDNRKKIAWKYATSWLAFDVISTIPSELARKISPSPLNSYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPRKTWIGASMGNFLEQSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDIIYMLFNLGLTAYLIGNMTNLVVHGTSRTRQFRDTIQAASSFAQRNQLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFNGVSNDLLFQLVSEMKAEYFPPREDVILQNEAPTDFYVLVTGAVDLIVMKNGVEQVIGEAKTGELCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANFGDGTIIMNNLLEHLKNLNDPIMEGVLVETENMLARGRMDLPLSLCFAALREDDMLMHQLLKRGLDPNESDNNGRTALHIAVSKGIENCVLLLLDYGADPNIRDADGNVPLWEAILGGYESIIKLLIDNGAKLSTGDVGQFACTAVEQNNLHLLKLILRYGGDITLPKAKGSTALHVAVSEGNIAMVNYLLDQGADIDKSDADGWTPRELADQQGHDDIIELFQSKGDRKSHSVVSVSEKQGRKRHLERFTSEPAMRLSSRDGSTFLEATTDVSWGRHRPRRRGNDFHNSLFGIMSTAHREEKDLLFGHTRSPMISPAGNPARITVSCPEKGDMAGKLVFLPGSFQELLEIGFKKFGVTPTMVLSKSGAQVEDIEVIRDDDHLVFVIDDETRQASLPNGERL* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00334 889 Pfam Ion transport protein 65 309 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte3g00334 889 ProSiteProfiles Ankyrin repeat region circular profile. 593 624 - -
Pte3g00334 889 CDD CAP_ED 382 487 IPR000595 -
Pte3g00334 889 PANTHER POTASSIUM CHANNEL AKT1 29 875 IPR045319 GO:0005249|GO:0006813
Pte3g00334 889 ProSiteProfiles Ankyrin repeat region circular profile. 560 591 - -
Pte3g00334 889 SUPERFAMILY Ankyrin repeat 531 714 IPR036770 -
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte3g00334 889 Gene3D Jelly Rolls 346 507 IPR014710 -
Pte3g00334 889 Gene3D - 66 303 - -
Pte3g00334 889 ProSiteProfiles Ankyrin repeat region circular profile. 657 688 - -
Pte3g00334 889 ProSiteProfiles KHA domain profile. 810 889 IPR021789 -
Pte3g00334 889 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515
Pte3g00334 889 FunFam Potassium channel SKOR 65 303 - -
Pte3g00334 889 ProSiteProfiles Ankyrin repeat profile. 560 592 IPR002110 GO:0005515
Pte3g00334 889 ProSiteProfiles cAMP/cGMP binding motif profile. 382 484 IPR000595 -
Pte3g00334 889 Pfam KHA, dimerisation domain of potassium ion channel 810 872 IPR021789 -
Pte3g00334 889 SMART ANK_2a 560 589 IPR002110 GO:0005515
Pte3g00334 889 SMART ANK_2a 690 719 IPR002110 GO:0005515
Pte3g00334 889 SMART ANK_2a 593 622 IPR002110 GO:0005515
Pte3g00334 889 SMART ANK_2a 527 556 IPR002110 GO:0005515
Pte3g00334 889 SMART ANK_2a 657 686 IPR002110 GO:0005515
Pte3g00334 889 SMART ANK_2a 624 653 IPR002110 GO:0005515
Pte3g00334 889 SUPERFAMILY cAMP-binding domain-like 307 502 IPR018490 -
Pte3g00334 889 SMART cnmp_10 382 499 IPR000595 -
Pte3g00334 889 SUPERFAMILY Voltage-gated potassium channels 59 303 - -
Pte3g00334 889 Pfam Ankyrin repeats (3 copies) 532 622 IPR002110 GO:0005515
Pte3g00334 889 Pfam Ankyrin repeats (3 copies) 632 711 IPR002110 GO:0005515
Pte3g00334 889 Gene3D - 528 712 IPR036770 -
Pte3g00334 889 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Pte3g00334 889 FunFam Potassium channel KAT2 370 506 - -
Pte3g00334 889 Pfam Cyclic nucleotide-binding domain 402 486 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00334 Pte-Chr3 2750747 2756326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00334 113 875 Ion Channels AT2G26650 68.571 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00334 K21867 - qsu:112036350 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00334 3 2750747 2756326 Pte3g00334 3 2750747 2756326 ECH