Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00029 ATGTACTATTTCATTTGCAAACACCACGATCCCTCAACCAATAATATGGTGAAGTTCCATGAAGAAATTGATCCACCAATGAGTCCTGGGTCAGGAGAAGAGCTAGACGATGATATCGATGCTGAAGACATCGATTATGATGAGCTCAAGAAGCGCATGTGGAAGGATCGAATTCGCATGCAGAAGCTCAAGGAGAAGATGAGCCAAGACGGGAGCAGCAGTGGGTCATCGATTAAACAAGAAGCATCTCGACGCAAGAAGATGTCTAGAGCACAAGACTCGATCCTCAAGTACATGGTGAAGATCATGGAAGTTTGTAAGGGTCAAGGTTTCGTCTATGGGATAGTGCCAGAGAAAGGGAAGCCTGTCACCGGTTCTTCTGACAGTTTGCGTGAGTGGTGGAAGGACACTGCCCGTTTTGATCAGAACGCTCCACTTGCAATTACGAAATACTTGACACTTCTTGATGAAGGTGATTTGAACGAAAATCCTTGCATCCATCTTCTTCAAGATATGCAAGACACCACTTTGGGTTCGCTGCTCTCTGCACTAATGCAACACTGCACTCCACCCCAAAGAAAGTTTCCATTAGAAAGTAGACTAGCTCCTCCATGGTGGCCAACCGGAGCCGAAAATTGGTGGGGTGAGCAAGGGTTCTCCCATGAACATGGCCCGCCGCCATATAGGAAGCCCCATGATCTTAAAAAGGCTTGGAAAGTTAGTGTTCTAGCGGCAGTGATCAAGCACATGTCTCCAGATGTGGATAAGATAAGAAGGCTGATTGCACAGTCCAAGTTTTTGCAGGACAAGATGACAGCAAAAGAAACTGCCACCTGGTCTAAAGTGGTAAGTCAGGAAGAAGCACTTAATAAACTTACTCAGAAGTGCCTCACAATCTCGGAATCTTCAGAGAATGAAATTGAAAAGGATGGTAAAAGCTCCACTGCTTTTGAAAGTAAAGGCAAATACATTGATCTCAACGACTCCTCCAACTCCAACTTAAGAAGCACAAGGGAAAAGAGGAAGTTCACGTTCGATCAAGATACTCCTGAAGATACATTATTTGCTTGTCAAAACTATGGGTGTCCAGAGAGTATATTACCTTTTGGTTTCCAGGATAAAAATCACAGGATGATCCATGAGATCAATTGTGCTTACCGCGCAGAGGAAAGCCTCAATGATGCTAATTGGTATGCCTATCCATCAGATTATAATGATAAACAACATATGGACATGATAGCGGCATGGCTTGACGCCGAGGTCGCCAAGGCTGATGAAAATAGTGTCACTGGAAACCACTCGCTAGATAAACTAGGAACTAATGCAGAGAACAGAGTAGGAGGATTAGAAAACAGAGCGCTGGATACAGCATTTGCCATGGATAGAGAAACTGCGGACTTCGGTACAAGCCCATCTCAAGAGAGTGATCTAGAACGAGAATCAATCCCCATATGGGATTTTTGGGGTTGCGATTGA 1476 0.4451 MYYFICKHHDPSTNNMVKFHEEIDPPMSPGSGEELDDDIDAEDIDYDELKKRMWKDRIRMQKLKEKMSQDGSSSGSSIKQEASRRKKMSRAQDSILKYMVKIMEVCKGQGFVYGIVPEKGKPVTGSSDSLREWWKDTARFDQNAPLAITKYLTLLDEGDLNENPCIHLLQDMQDTTLGSLLSALMQHCTPPQRKFPLESRLAPPWWPTGAENWWGEQGFSHEHGPPPYRKPHDLKKAWKVSVLAAVIKHMSPDVDKIRRLIAQSKFLQDKMTAKETATWSKVVSQEEALNKLTQKCLTISESSENEIEKDGKSSTAFESKGKYIDLNDSSNSNLRSTREKRKFTFDQDTPEDTLFACQNYGCPESILPFGFQDKNHRMIHEINCAYRAEESLNDANWYAYPSDYNDKQHMDMIAAWLDAEVAKADENSVTGNHSLDKLGTNAENRVGGLENRALDTAFAMDRETADFGTSPSQESDLERESIPIWDFWGCD* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00029 491 Gene3D - 77 154 IPR023278 GO:0003700|GO:0005634
Pte3g00029 491 Gene3D - 159 296 IPR023278 GO:0003700|GO:0005634
Pte3g00029 491 Pfam Ethylene insensitive 3 47 287 IPR047091 GO:0003700
Pte3g00029 491 FunFam Ethylene insensitive 3-like 1 160 296 - -
Pte3g00029 491 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Pte3g00029 491 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 35 399 IPR006957 GO:0003700|GO:0005634
Pte3g00029 491 Coils Coil 46 66 - -
Pte3g00029 491 MobiDBLite consensus disorder prediction 64 89 - -
Pte3g00029 491 FunFam Ethylene insensitive 3 family protein 77 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00029 Pte-Chr3 472395 473870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00029 21 386 EIL Transcription Factor Family AT5G10120 54.642 5.34e-133 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pte3g00029 EIN3 2.8e-112 No_clan