Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02305 ATGCAGGAAATGCATCCGATGGGTGGGGGAAGATTCTTCGCTGGCGGTGGCGGCGGTGGAGATAGGAGGATGAGACCTAACCCCAGCCCAAACCATCAGTCTCTCAAGTGTCCTAGGTGCGAATCCCTTCACACCAAATTCTGCTATTACAACAACTACAACCTCTCCCAGCCACGCCATTTTTGTAAGAGTTGCCGACGCTACTGGACCAAAGGCGGCGTTCTTCGCAACGTTCCTGTTGGGGGTGGTTGCCGGAAATCAAACCGGTCCAAGCCTAGAAGCTCAGCGACGTCAGAGAATCTGACAAGTGCATCTCCCCCTACGACGACTGTAACGGACACACCTGCGGCTCTACCAACGGCAGCGTCACAGCAAGAATTTAAATCAAACTCGTATTCTACTAGCGAAAGCTCCAGCCTTACAGCGGCAAACATAGCCTCAGTCTCAATCAACACAACAGAAGCCGCATCGACACCAACGGAAAACTCGGCTACGGATCATCAGCTCCACATGCACGAACCAAAGTTACTTGTGAACAGTGAAAGTGGGATCCCTCCTTTGGAAGCAGGCCTGCACGAACAAGCGGCAGACTCTGGGATTTTCTCGGAGATTGGGAGCTTCACGAGTTTGGTTCCCTCCATCCGCGAAACATTGCCTTCTAGTCTGGGTAATATGATGGATACGGAACCGTTTCGGTTCAATCCACTAGGTAGGAATCATCTGGGGCAGCCTAACCAGGGTTTGAAGTTCCCGGAAATCACAGGTGGATCGATGGTGGATCAGACCGTCCAAGTTGATCTATCCGATTTGCAGAACAAAACGGCAAACGGTGGCAGTGGTTTTGGATCATTATTGGATTGGCATGGCGTTGGAGAACAAGGTCTGTTTGATGTTGCAAATCACAACCCTGTTGATCAAGTTTACTGGACTCAGAATTTCTGGGCTGAACATGAACACACAAGTTTATATCTTCCTTGA 978 0.502 MQEMHPMGGGRFFAGGGGGGDRRMRPNPSPNHQSLKCPRCESLHTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSNRSKPRSSATSENLTSASPPTTTVTDTPAALPTAASQQEFKSNSYSTSESSSLTAANIASVSINTTEAASTPTENSATDHQLHMHEPKLLVNSESGIPPLEAGLHEQAADSGIFSEIGSFTSLVPSIRETLPSSLGNMMDTEPFRFNPLGRNHLGQPNQGLKFPEITGGSMVDQTVQVDLSDLQNKTANGGSGFGSLLDWHGVGEQGLFDVANHNPVDQVYWTQNFWAEHEHTSLYLP* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02305 325 Pfam Dof domain, zinc finger 33 89 IPR003851 GO:0003677|GO:0006355
Pte2g02305 325 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pte2g02305 325 MobiDBLite consensus disorder prediction 79 115 - -
Pte2g02305 325 MobiDBLite consensus disorder prediction 88 115 - -
Pte2g02305 325 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pte2g02305 325 MobiDBLite consensus disorder prediction 1 35 - -
Pte2g02305 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 173 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02305 Pte-Chr2 42776151 42778135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02305 21 326 C2C2-Dof Transcription Factor Family AT5G60850 40.385 1.80e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte2g02305 zf-Dof 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02305 - - zju:107419070 295.434