Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02216 ATGGTGAAGATTTGTTGCATCGGTGCTGGATATGTTGGAGGTCCTACTATGGCAGTAATAGCTCTCAAGTGCCCATCAATTGATGTGGTCGTGGTTGATATCTCAGAATCTCGGATTTCCGCCTGGAATAGTGACCAGCTTCCAATCTACGAGCCTGGTCTTGCAGAAGTAGTGAAGCAATGCAGAGGGAAAAACCTCTTTTTCAGTACAGATGTAGAAAAACATGTCTCAGAAGCATACATCATTTTCGTTTCAGTCAACACCCCAACAAAAACCAGAGGCCTTGGAGCTGGCAAAGCTGCGGACTTGACATATTGGGAGAGTGCAGCTCGGATGATAGCTAATGTTTCGAAGTCAGACAAGATTGTGGTCGAGAAATCAACTGTTCCTGTCAAAACAGCTGAAGCAATTGAAAGGATTTTGACCCACAATAGCAATGGCATCAAATATCAAATTCTCTCAAATCCTGAATTCCTCGCTGAAGGAACTGCTATACAGGACCTTTTCCATCCTGACAGGGTTCTCATCGGAGGGAGGGAAACGCCAGATGGTTTCAAAGCAATCCAGGCATTGAAAGATGTTTATGCTCAGTGGGTGCCTGAAGAGAGAATTCTGACTACCAATCTTTGGTCAGCAGAGCTGTCCAAGCTAGCAGCCAATGCCTTCTTGGCTCAGAGGATATCATCAGTTAATGCCATGTCTGCACTTTGTGAGGCATCTGGGGCTGATATTTCACAGGTTTCTCATGCTGTCGGGAAAGACACCAGGATTGGACCTCAGTTCCTCAACGCAAGTGTTGGATTTGGAGGTTCTTGTTTCCAAAAGGACATACTCAACTTGGTCTACATCTGTGAATGCAATGGTCTGAATGAAGTAGCAAATTACTGGAATCAGGTCATCAAGGTTAATGATTACCAAAAGAACCGTTTTGTCAACAGGGTTGTGTCATCCATGTTCAATACAATTTCAGATAAAAAGATTGCAATTTTAGGTTTTGCTTTCAAGAAGGACACAGGTGACACAAGGGAAACTCCTGCCATTGATGTTTGCAAAGGTCTCTTACGGGATAAAGCTCGCTTGAGCATATATGATCCTCGAGTTACTGAGGATCAAATTGGAAGGGACTTATCAATGAACCCTACTACTTTTAAACAGGTCAACTTTGCTTGTGATGCGTATGAAGCAACTAAGGATGCTCATGGGATATGTGTTCTCACAGAATGGGATGAGTTCAAGACACTTGATTATCAAAGAATTTATGATAATATGCGGAAGCCTGCATTCGTTTTCAATGGCAGAAACATTTTAAACGTAGAAAAGCTAAGACAAATTGGGTTTATTGTTTACTCAATAGGTAAGCCATTAGACCCTTGGCTGAAAGACATGCCTGCTGTGGCATGA 1401 0.4276 MVKICCIGAGYVGGPTMAVIALKCPSIDVVVVDISESRISAWNSDQLPIYEPGLAEVVKQCRGKNLFFSTDVEKHVSEAYIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIANVSKSDKIVVEKSTVPVKTAEAIERILTHNSNGIKYQILSNPEFLAEGTAIQDLFHPDRVLIGGRETPDGFKAIQALKDVYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEASGADISQVSHAVGKDTRIGPQFLNASVGFGGSCFQKDILNLVYICECNGLNEVANYWNQVIKVNDYQKNRFVNRVVSSMFNTISDKKIAILGFAFKKDTGDTRETPAIDVCKGLLRDKARLSIYDPRVTEDQIGRDLSMNPTTFKQVNFACDAYEATKDAHGICVLTEWDEFKTLDYQRIYDNMRKPAFVFNGRNILNVEKLRQIGFIVYSIGKPLDPWLKDMPAVA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02216 466 Gene3D - 241 463 - -
Pte2g02216 466 Gene3D - 1 208 - -
Pte2g02216 466 SMART UDPG_MGDP_dh_C_a_2_a 328 438 IPR014027 GO:0016616|GO:0051287
Pte2g02216 466 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Pte2g02216 466 PIRSF UDPglc_GDPman_dh 2 453 IPR017476 GO:0016616
Pte2g02216 466 FunFam UDP-glucose 6-dehydrogenase 241 464 - -
Pte2g02216 466 NCBIfam nucleotide sugar dehydrogenase 3 434 IPR017476 GO:0016616
Pte2g02216 466 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 437 IPR014027 GO:0016616|GO:0051287
Pte2g02216 466 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 465 IPR028356 GO:0003979
Pte2g02216 466 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 184 IPR001732 GO:0016616|GO:0051287
Pte2g02216 466 PIRSF UDPglc_DH_euk 1 466 IPR028356 GO:0003979
Pte2g02216 466 Gene3D - 209 240 - -
Pte2g02216 466 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 449 IPR036220 -
Pte2g02216 466 FunFam UDP-glucose 6-dehydrogenase 209 240 - -
Pte2g02216 466 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 202 IPR036291 -
Pte2g02216 466 FunFam UDP-glucose 6-dehydrogenase 1 208 - -
Pte2g02216 466 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02216 Pte-Chr2 41947528 41949728 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00841 7 32577334 32578776 Pte2g02216 2 41947528 41949728 RCT
Pte4g00646 4 37349164 37352162 Pte2g02216 2 41947528 41949728 RCT
Pte2g02216 2 41947528 41949728 Pte2g02216 2 41947528 41949728 RCT