Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01768 ATGCCGGAAAGCAAAGACCAGGCAATCAAGCTTTTCGGAAAGAAGATTCCTTTAACGGCTGACTGTGGGACGGAACCAATCCGACTGGATGACTCCACTCCCTGTGCTTTGAATCCTATTGACATTCAAGAAAAACAGACCGAAAGAGATGAAGAAGAAGGAGAAACACCTGATAAGGAATCCACATCAGAAAAAGCAGCTGATACTGCTATAGAACAAAAGGATGATCCACCCGAGAATTCGGATGACACCAATAATTCAGAGGCTACTGCAAACCCTAAAACAAATGAACTCACTGCAGAAGAACGATCTTCCGTGACAGAGAAGGAGCATAATGATGCAGGCAACTCACAAGAGAAAACCCTGAAGAAACCAGATAAAATACTTCCATGCCCACGATGCAATAGTATGGATACAAAATTCTGTTACTACAATAACTATAATGTTAATCAACCACGACATTTCTGCAAGGCCTGTCAAAGGTATTGGACTGCAGGTGGTACTATGAGAAATGTACCAGTTGGAGCTGGAAGAAGGAAGAACAAGTACTCTGCCTCACACAATCGTCATGTCACCATTTCTGAGGCTCTTCAAGCAGCTAGGATTGATGCCACAAATGGAACACATCTGCCCGCATTAAAAAACAATGGTAGAGTCTTGAGCTTTGGCTTAGATGGTCCTATTTGTGATTCCATGGTTTCTATCCTGAATCTTACAGATAAAAAAGTTCTTAATGGTACCAGAAATGGATTTCACAGCCTTGGAGAACAAAGCATTCCCGCTCCTCACAAAGCCAATGGTGATGACTGCTCTAGTACTACTACTTCTGTTACAGCGACAACTTCAGCGGAAGATGTTGGCAAAAGACAATCATTACAGTCACCATTTCCAGCTAGTAATGGGTTCCCTGCTCAAAATCCATGTCTTCCAGGTGTTCCATGGCCTTATTCTTGGAATTCTACAGCCCCACCACCTACTTTCTGTCCTGCAGGATTTCCCCTTTCATTTTATCCAGCACCATTTTGGAACTGTAGTGTCCCCAGCAATTGGAGCATTCCCTGGTTCTCTCCACAACCCTCTTCCCCGAGTCAAAACTCTCCAAATTCCGGTCCAAATTCTCCTACATTAGGAAAGCATTCAAGGGACGGGGATGTGCTTAAATCAGACAATTTGGAGCAAGAAGAGTCACTGAAACAGACAAACGGATGTGTTCTGGTTCCCAAAACTTTGAGAATCGATGATCCAAATGAAGCTGCTAAGAGCTCTATATGGGCAACGCTTGGCATTAAAAATGAAGCAGTGTGCGGGGGAGGCATGTTGAAGGCTTTTCAATTAAAGAATGATGAAAAGAACCATGTCATAGAAGCCTCGCCAGTGCTAAGGGCTAACCCTGCAGCCTTGTCAAGATCCCTTAACTTCCATGAGAGTTCTTAA 1434 0.4358 MPESKDQAIKLFGKKIPLTADCGTEPIRLDDSTPCALNPIDIQEKQTERDEEEGETPDKESTSEKAADTAIEQKDDPPENSDDTNNSEATANPKTNELTAEERSSVTEKEHNDAGNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKYSASHNRHVTISEALQAARIDATNGTHLPALKNNGRVLSFGLDGPICDSMVSILNLTDKKVLNGTRNGFHSLGEQSIPAPHKANGDDCSSTTTSVTATTSAEDVGKRQSLQSPFPASNGFPAQNPCLPGVPWPYSWNSTAPPPTFCPAGFPLSFYPAPFWNCSVPSNWSIPWFSPQPSSPSQNSPNSGPNSPTLGKHSRDGDVLKSDNLEQEESLKQTNGCVLVPKTLRIDDPNEAAKSSIWATLGIKNEAVCGGGMLKAFQLKNDEKNHVIEASPVLRANPAALSRSLNFHESS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01768 477 MobiDBLite consensus disorder prediction 357 376 - -
Pte2g01768 477 MobiDBLite consensus disorder prediction 101 127 - -
Pte2g01768 477 ProSitePatterns Zinc finger Dof-type signature. 131 167 IPR003851 GO:0003677|GO:0006355
Pte2g01768 477 Pfam Dof domain, zinc finger 126 182 IPR003851 GO:0003677|GO:0006355
Pte2g01768 477 MobiDBLite consensus disorder prediction 254 299 - -
Pte2g01768 477 MobiDBLite consensus disorder prediction 267 299 - -
Pte2g01768 477 MobiDBLite consensus disorder prediction 357 384 - -
Pte2g01768 477 MobiDBLite consensus disorder prediction 14 129 - -
Pte2g01768 477 MobiDBLite consensus disorder prediction 83 100 - -
Pte2g01768 477 PANTHER CYCLIC DOF FACTOR 2 4 477 IPR045174 GO:0003700|GO:0006355
Pte2g01768 477 MobiDBLite consensus disorder prediction 43 81 - -
Pte2g01768 477 ProSiteProfiles Zinc finger Dof-type profile. 129 183 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01768 Pte-Chr2 37477749 37480658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01768 1 475 C2C2-Dof Transcription Factor Family AT3G47500 48.163 9.62e-125 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte2g01768 zf-Dof 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01768 - - qsa:O6P43_022858 613.609