Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00791 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTAAACGCCCTTCAATGAAGAGACAACCACATGAGCAACAAAATTGTGAACCTTTGAAGTGTCCGAGATGTGATTCCACAAACACCAAGTTCTGTTACTTCAACAACTACAATCAGTCTCAGCCTCGCCATTACTGCAGAGCTTGTAAAAGGCATTGGACTAAAGGTGGATCTCTTCGCAATGTTCCTGTTGGTGGGGGACGCAAAAATAGAAGAATAAAGAAAACCACTGCTTCACTAACTGTTGCTTCTGCAACTGCAACACAAGCCAACACAACAACTCCAACTACCAGTAACAGCAACGTAAGCACCCACATGGCCATTCAAAATTCACTGCAGATTCTCAATCTTCCTCTAGTACCTGATGGTCAGAAGAACTTTCTCTATCAACCACTGATTCATCAAGCTCCTTTGTTGCTGCAACATGATTCGACCAATTACACATGTGACTTAGATGATAAGTTTTCTATGGGGACCAAGAATGGTTTATCGATGGCTACAACTGCGATGACTTTGCCTGTGCAGCTCCAAAACCATTGCCTACACTTTCCTTTCTCAAGCTCAAGTTACTGTGACACAAACTTGTCATCCATCACAACAGCTTTTCAGTCCAATGTTTATGATCATGGTAATGAGTTTAAAACCATTGACGAGCCAACCATTACCAGTATGATCATGTCCGGCACATGCGGCAATCAAGCACAACCATGGCAGGTACCTTTTCTAGACAATGGCATGGACATGCCAAGTTATTGGAATTGGGATGATATTGACTCCCTGGTGTCAACTGATTTAAAACCCTGA 831 0.426 MGLSSKQVSSKRPSMKRQPHEQQNCEPLKCPRCDSTNTKFCYFNNYNQSQPRHYCRACKRHWTKGGSLRNVPVGGGRKNRRIKKTTASLTVASATATQANTTTPTTSNSNVSTHMAIQNSLQILNLPLVPDGQKNFLYQPLIHQAPLLLQHDSTNYTCDLDDKFSMGTKNGLSMATTAMTLPVQLQNHCLHFPFSSSSYCDTNLSSITTAFQSNVYDHGNEFKTIDEPTITSMIMSGTCGNQAQPWQVPFLDNGMDMPSYWNWDDIDSLVSTDLKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00791 276 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 182 IPR045174 GO:0003700|GO:0006355
Pte2g00791 276 Pfam Dof domain, zinc finger 27 80 IPR003851 GO:0003677|GO:0006355
Pte2g00791 276 MobiDBLite consensus disorder prediction 1 28 - -
Pte2g00791 276 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Pte2g00791 276 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00791 Pte-Chr2 6898255 6900038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00791 6 125 C2C2-Dof Transcription Factor Family AT3G45610 47.244 1.43e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte2g00791 zf-Dof 9.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00791 - - tcc:18596891 247.284