Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00370 ATGGGCACTATCTCTTCCACTGTTTCATTTTTGTTAACTGCACTCTTGTTCTGTCTACATCTTCAGCATGAAGTGGCTGCTACTGATACTGATAACTTGGCAGCGTCGAGAAGAGAAGCTTTAGAAATCATCATAGGTGTTGGGGGCAATGAACCTCCTCCTGAAGAACATGCCTATTCACCACCCCCACCTGCCTTTGAGAACAAGAGACTTGAGAATGTCTACCATGTGATTCAGCATCTAAAGAACCAAATCACTGGTGACCCCAAAGGCTACACGGACACATGGGTTGGCGCTGACGTTTGTAGCTACAAGGGCTTAAGATGTGCAATATATCCTGGCACAAGAGAGCGTGCAGTTTCAGGATATGACTTCAATCAAGCTGGTCTTTGTGGACCAAACCTCAACCTCTTTGGATTGCTGGACAAGTTACCTGATACAACCTACTTCCATGCCAACTCCAATAACTTCACTTCTTCTGTCCCTTTTGACATCACCAAGTTCATATATTTCTACGAGATTGACCTCAGTAACAACAAACTGGTTGGTGAGTTTCCAAAGGCAGTTCTTGGCTCCAAGAATTTAACTTTCATTGATCTCAGGTACAACTCGTTTCACGGGACAGTTCCATTAGAATTGTTCACACTAGATGTCGATGTAATCTTCATCAACCATAACAACTTCAACCAATCCCTTCCTGAAAATTTTGGCTCCACCCCAGCTTTGTATCTCACCTTTGCGAGCAACAACTTCACCGGTCCGATCCCTAGTAGCATTGGCAAGGCACCGAAACTCAAGGAGGTGCTATTCTTGAACAATAGTTTCTCAGGCTGCTTGCCGTATGAAATTGGCTACCTCAAGAATGCTACTGTTTTTGATGTGAGCATCAACCAGTTGACTGGGCCGATACCGCAATCTTTTGCTTGCTTGAAGAAAATTCAGTATCTCAACTTGGCTCAGAATTCCTTGTCTGGACCTGTACCAGAGCAGGTATGCAAGCTGCCAAACCTGGTCAAATTGACATTGTCAGGAAACTATTTCAACCGGGTTGGACCTGAATGCTCCAAGCTCATACAGAGAAGAGTGCTTGATGTAAGGAAGAACTGCATTCCAGGTTTTCCAGATCAGAGATCTAAATATGAATGTGATGCATTCTATTCTACGCCAAGGTTCTGCCCCAATGCGAAGTCATTAAGTTACATACCTTGTGCGAAGAACTATGAAAGTTGGCAGAAGACACCAGATCCTCCAGCAGCACCAGTAACTTATAAAGCATTGGCACCACACCATTTGTGA 1296 0.4414 MGTISSTVSFLLTALLFCLHLQHEVAATDTDNLAASRREALEIIIGVGGNEPPPEEHAYSPPPPAFENKRLENVYHVIQHLKNQITGDPKGYTDTWVGADVCSYKGLRCAIYPGTRERAVSGYDFNQAGLCGPNLNLFGLLDKLPDTTYFHANSNNFTSSVPFDITKFIYFYEIDLSNNKLVGEFPKAVLGSKNLTFIDLRYNSFHGTVPLELFTLDVDVIFINHNNFNQSLPENFGSTPALYLTFASNNFTGPIPSSIGKAPKLKEVLFLNNSFSGCLPYEIGYLKNATVFDVSINQLTGPIPQSFACLKKIQYLNLAQNSLSGPVPEQVCKLPNLVKLTLSGNYFNRVGPECSKLIQRRVLDVRKNCIPGFPDQRSKYECDAFYSTPRFCPNAKSLSYIPCAKNYESWQKTPDPPAAPVTYKALAPHHL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00370 431 Gene3D Ribonuclease Inhibitor 242 409 IPR032675 -
Pte2g00370 431 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 414 - -
Pte2g00370 431 Pfam Leucine rich repeat 290 346 IPR001611 GO:0005515
Pte2g00370 431 Gene3D Ribonuclease Inhibitor 75 235 IPR032675 -
Pte2g00370 431 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 256 350 - -
Pte2g00370 431 SUPERFAMILY L domain-like 136 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00370 Pte-Chr2 2861787 2863082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00370 19 389 Leucine-rich Repeat extension Gene Families AT3G24480 41.398 2.00e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00370 - - qsa:O6P43_011750 492.656