Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02313 ATGCAGGGAGTGCCTTCTATCAGTGGGGGTAGATTCTTCGAGGGTGGCGATGGCAGCTGTGTTGGAGATAGGAGGCTAAGGCCTCAGCAGCAACACCAGAACCATCAGTCTCTCAAGTGTCCTAGGTGTGATTCCCCTAACACGAAGTTTTGCTATTACAACAACTACAACCTTTCACAGCCGCGCCATTTTTGCAAGAGCTGCCGTCGCTACTGGACCAAAGGCGGTGTTCTTCGTAACGTGCCAGTTGGAGGTGGTTGCCGGAAATCAAAGCGTTCCAAGGCTAAGAACTCGTCCTTAGAGAACAGGACGAGGTCACCGCCTCCTGCAACATCTACAGCTATAGAAACACCAGCTCCAACATCTTCCCAGAAGAAGCTTAAATCAAATTCTCATTCAAGTAGTGAAAGTTCTAGCCTTACTAACACAGCCTCAGCTGCTACAGAAGCCATGTCGGCGCCAACGCCGAACACGGCAACGAATCATTTACTTGGCATGCAGGAGTCGAAGTTCTTCGTGAACAATCAAAGTGGGATGGCTCATTTGGAAGGGGGTCTGCTGGATCAGGGAGCAGAGTCTGGGATTTTCTCAGACATTGGGAACCTCACGAGCTTGATTACCTCGACAAGCGAAGCATTGCCTTTTAGTTTTGGCAATATCTCTGATATGTCTCCGTTTAGGTTCTGTCAACTAAATCACGAGCATTTGGATCAGAGCGGTATTCAGCAGCAGAGGTGGATGGTGGGTGATAGCATGGGTGATCGTCATTCTCAGGATTTGAAGTTGCCAGAAACCACAGGTGGGTCGTCTATGATTGATCAGACTGTCCAAGTTGATTTCTCGTCAACTCTGCAAAGTAAAGGGACCAACGGTGCAAGTTTTGGATCGCTGGATTGGCAGGGCGTTGGTGATCCAGGTTTGTTCGATCTTCCTAACACAGTTGATCAAACTTACTGGAGTCAGAGTCATTGGACTGAGCAAGACACCTCTAATCTCTATCTTCCGTAA 1008 0.4851 MQGVPSISGGRFFEGGDGSCVGDRRLRPQQQHQNHQSLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKAKNSSLENRTRSPPPATSTAIETPAPTSSQKKLKSNSHSSSESSSLTNTASAATEAMSAPTPNTATNHLLGMQESKFFVNNQSGMAHLEGGLLDQGAESGIFSDIGNLTSLITSTSEALPFSFGNISDMSPFRFCQLNHEHLDQSGIQQQRWMVGDSMGDRHSQDLKLPETTGGSSMIDQTVQVDFSSTLQSKGTNGASFGSLDWQGVGDPGLFDLPNTVDQTYWSQSHWTEQDTSNLYLP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02313 335 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Pte1g02313 335 MobiDBLite consensus disorder prediction 15 40 - -
Pte1g02313 335 MobiDBLite consensus disorder prediction 100 161 - -
Pte1g02313 335 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 227 IPR045174 GO:0003700|GO:0006355
Pte1g02313 335 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Pte1g02313 335 MobiDBLite consensus disorder prediction 82 161 - -
Pte1g02313 335 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02313 Pte-Chr1 43817739 43821926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02313 23 336 C2C2-Dof Transcription Factor Family AT5G60850 42.593 1.79e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte1g02313 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02313 - - qsa:O6P43_002258 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02313 1 43817739 43821926 Pte1g02313 1 43817739 43821926 ECH