Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01858 ATGGGTGAAATTGAAGATAGTGGAGCTGATATTGGCTCTGACGTAGAAGTTGATGACTTACGAGATGATAACCTAGAGGAGAAAGATGTCAGTGATGAAGAGATTGATGCAGAGGAATTGGAAAGACGGATGTGGAAAGATCGGATCAAGCTTAAAAGGATCAAGGAAAGACAGAAGCTTGTGGCTCAGCAAGGTGCAGAGAAACAAAAGCCCAAGCAAATTTCTGATCAAGCTCGCAGGAAAAAAATGTCAAGAGCGCAAGACGGGATTTTGAAGTACATGCTGAAGTTGATGGAAGTATGTAAAGCTCGTGGATTTGTGTATGGGATTATTCCCGAGAAAGGGAAGCCAGTTAGTGGTTCTTCTGATAACATCCGTGCTTGGTGGAAAGAAAAAGTCAAGTTTGACAAGAATGGGCCAGCAGCTATAGCTAAATATGAAGCTGACTGCCTTGCAATTGTTGATGCTGATAACAATAGAAATGGAAATTCTCAGAGTGTACTTCAAGACCTTCAGGATGCAACACTTGGGTCTCTTTTGTCTTCTTTGATGCAACATTGCGATCCACCTCAGAGGAAATACCCATTGGAAAAGGGAATTCCACCCCCTTGGTGGCCAACTGGGAATGAGGAGTGGTGGATGAAATTGGGGTTGCCTCAAGGTCAAAGCCCTCTTTATAAGAAGCCGCATGATTTGAAGAAGATGTAG 708 0.4322 MGEIEDSGADIGSDVEVDDLRDDNLEEKDVSDEEIDAEELERRMWKDRIKLKRIKERQKLVAQQGAEKQKPKQISDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEADCLAIVDADNNRNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEEWWMKLGLPQGQSPLYKKPHDLKKM* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01858 235 MobiDBLite consensus disorder prediction 1 37 - -
Pte1g01858 235 MobiDBLite consensus disorder prediction 1 36 - -
Pte1g01858 235 Coils Coil 37 57 - -
Pte1g01858 235 SUPERFAMILY DNA-binding domain of EIN3-like 166 235 IPR023278 GO:0003700|GO:0005634
Pte1g01858 235 Gene3D - 157 235 IPR023278 GO:0003700|GO:0005634
Pte1g01858 235 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Pte1g01858 235 MobiDBLite consensus disorder prediction 60 81 - -
Pte1g01858 235 Pfam Ethylene insensitive 3 38 235 IPR047091 GO:0003700
Pte1g01858 235 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 235 IPR006957 GO:0003700|GO:0005634
Pte1g01858 235 FunFam Ethylene insensitive 3-like 1 72 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01858 Pte-Chr1 39874907 39876206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01858 16 235 EIL Transcription Factor Family AT1G73730 82.727 7.71e-130 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pte1g01858 EIN3 4.9e-101 No_clan