Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01763 ATGGATCCTTCAACTGCACAACATCAGGAAATGCCTAGTCATTCGCTAGAAAACATGTTGGTCTGTTCAAAAGCCCAACAGGAAAGAAAACCAAGGCCTCAGCCTGAACAAGCTCTCAAATGTCCTAGATGTGATTCCACCAACACTAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCGAGATACTTCTGCAAATCTTGCAGAAGGTACTGGACCAAAGGAGGAACATTGAGAAATGTCCCAGTAGGTGGAGGATGCAGGAAAAACAAGAGGTCGTCATCATCTGCATCATCCAAAAGGACACAAGATATTCAACCACTCTCACCGAATTCCAATCCACTACCTGGCCTCCCTGCATTGTCTTATGACTCCAGTGACCTCACACTTGCACTAGCTAGACTTCAAAAGCAAACATGTGGGCAGTTGGGTTATCATGATCATCAGCAGGATCTCTCTATTGTAGGAAATCCCTCCCACTGTGATATTCTTGGCAACAATGGCATAAACACATTAGCTTCCACAAATCCGGGCTTCATTGATGCACTCAGGAGTGGGTTCCTTGAAACCCAGAATAATCTTTACTATGGATTTGGAGAAGTTGACAATGGTAATGGTGTTGGTGTGGGGGTTGGTGGAGAAATGATGCTACCAAATTATGATCAGGAAACAAGTAATGCAACTACTCAAGCTGTTACAGTCACTACAGTGAAACAAGAGCTATGCAATGCAAGAGAACAAAGTGACAACAGGATCTTATGGGGTTTTCCATGGCAGTTCAATGGTGAAGGAAATATCGGTGAGGTTGATTCAGGAAGAGGGACTTGGAATAACTTTACTTCCTCTTGGCACGGACTTCTCAATAGTCCTCTCATGTAG 882 0.4354 MDPSTAQHQEMPSHSLENMLVCSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSASSKRTQDIQPLSPNSNPLPGLPALSYDSSDLTLALARLQKQTCGQLGYHDHQQDLSIVGNPSHCDILGNNGINTLASTNPGFIDALRSGFLETQNNLYYGFGEVDNGNGVGVGVGGEMMLPNYDQETSNATTQAVTVTTVKQELCNAREQSDNRILWGFPWQFNGEGNIGEVDSGRGTWNNFTSSWHGLLNSPLM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01763 293 MobiDBLite consensus disorder prediction 84 121 - -
Pte1g01763 293 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Pte1g01763 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 182 IPR045174 GO:0003700|GO:0006355
Pte1g01763 293 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Pte1g01763 293 MobiDBLite consensus disorder prediction 90 120 - -
Pte1g01763 293 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01763 Pte-Chr1 38952594 38954539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01763 1 294 C2C2-Dof Transcription Factor Family AT2G28510 39.938 9.72e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte1g01763 zf-Dof 5.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01763 - - qsa:O6P43_000286 402.905