Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01159 ATGGCTGTCGAAGCTCACAATCTTAACCTTTTTTCTCCTCAGCAGCTCGGGCCAAACAGGGAAATTTTGAACCCTGTTGAAGCGAACATGAATCTCTACAATACCCAAATGGGATACTCGTTACCGTTATCAGGTATTACCACGGAGACGAGGCTTCCGGCGTACAATTCATGGATCGGGGACTCGGTTCCTGTCAAATCTGAGAGTGGCTTGACTTGCAACCTTCCTGTGCAAAGAAAGCGTAGCAGAGATTCACTCACACCCTTCTTGTCTTACAAGTCAAGCACCCCACAGCTCCAGAAAAATTCCACTTCATTTTCGTTTCTTGGTGAAGCTGTCTCCCTTCCGATCCAACAACAGCAACTCGATGTCAATCTCGTGATTGCCCAACATATGGCGAAGGTGAGGATGGAGATTGAGGAGAAGAGGAAAAGACAAGCGAGGAGGATATTGGAGGCAATCGAATTTGGGGTGATGAAGAAACTGAAGTCGAAAGACGAAGAGATAGAGAAAATTGGGAAGCTGAATTGGGCACTCCAAGAACGAGTCAAGTCCTTGTGTATAGAGAATCAGATATGGAGGGATTTGGCTCAGACCAATGAAGCCACGGCCCATGCTCTCCGTACAAACCTTGAGCAAGTGTTGGCACAGGTCAAGGTTGACCGCACCCATGGAACGGGGTTAGAGGATGAACTCCCAGTAGCCGCATCCGCATTCATGGAGGATGCCCAATCGTGCTGCGGAAGCAATGATGGTGTTGCCGGGTGGGGTGAGGACGAGAGGCAAGGGATGGGGGAGTTGCGCATGTTAGCAGGTGAGGCGCATGGTCAAGGTGAAGACTATGAAGGCACAAGCAGGCGTCATTGCAGCCAAGGCAGTAGGTTGTGCAGAAGCTGTGGGAAGGAGGAGTGTTGTGTACTGATTTTGCCTTGCAGGCATCTCTGCCTGTGTACTGTTTGTGGATCTACCTTACACACTTGTCCTATCTGTAAATCCATCAAGAATGCAAGTGTCCATGTGAACATGTCTTAG 1032 0.4922 MAVEAHNLNLFSPQQLGPNREILNPVEANMNLYNTQMGYSLPLSGITTETRLPAYNSWIGDSVPVKSESGLTCNLPVQRKRSRDSLTPFLSYKSSTPQLQKNSTSFSFLGEAVSLPIQQQQLDVNLVIAQHMAKVRMEIEEKRKRQARRILEAIEFGVMKKLKSKDEEIEKIGKLNWALQERVKSLCIENQIWRDLAQTNEATAHALRTNLEQVLAQVKVDRTHGTGLEDELPVAASAFMEDAQSCCGSNDGVAGWGEDERQGMGELRMLAGEAHGQGEDYEGTSRRHCSQGSRLCRSCGKEECCVLILPCRHLCLCTVCGSTLHTCPICKSIKNASVHVNMS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01159 343 CDD mRING-HC-C3HC5_CGRF1-like 294 331 - -
Pte1g01159 343 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
Pte1g01159 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 342 IPR013083 -
Pte1g01159 343 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 67 340 IPR017066 -
Pte1g01159 343 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01159 Pte-Chr1 31797728 31799799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01159 282 332 Miscellaneous Gene Families AT4G39050 35.294 1.33e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01159 1 31797728 31799799 Pte1g01159 1 31797728 31799799 RCT