Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01110 ATGACAAATGAGCCTGTTAACTCTGTAAACGTGAATCAAGTCAAAAAGAGTATTATCAGCTCGGCTCAGAATCCAACAAATCATGAACCTAATATTACGGAGCAGGATTTGAAAACTGAGGCAGATTTGAGAAGCCCTCCATTTGCTGAACATCAAAAACCAGAAGCAGGATCAGCTAAGATATCATCTGATTCATCTGGTAGTACTCAAGGTGGAAATCCAAGCCAAAGATCAATGCCTCCAACTCCAAATTATGAAGCACCAACTACCACAGAGTCTTCTGCCAAGGCAATGCCTACACCTACTAAGACTCAGAGCTATAGAAACAGGGGCAGCTCACCAGGCTCAGATACAGTGTCAGCTCCATTCAAGCCACATACTGGTGGTGACGTAAGGTGGGATGCCATTAATATGGTTTCCAAAGAGACCCCTTTAAATCTAAGCAATTTTCGGCTGCTGAAACGCCTCGGGTACGGAGATATTGGAAGTGTGTATCTTGTGGAACTTAGAGGAACTAAAACCCACTATGCTATGAAAGTCATGGACAAGGCATCACTTGCAAGCAGAAATAAACTACTGAGAGCTCAAACAGAAAGAGAGATACTTGGCCTTCTTGATCATCCATTCTTGCCCACTTTGTATTCTCACTTTGAAACTGACAAGTTTAACTGCTTGGTTATGGAGTTCTGTAGTGGTGGCAATCTTCATTCCCTCAGACAGAAGCAGCCCGACAAATATTTCACTGAAGAAGCTGCAAGGTTTTATGCTTCCGAGGTTCTGTTAGCTCTTGAGTACCTACATATGCTAGGCATTGTATACAGAGATCTGAAGCCTGAGAATGTGTTAGTCAGAGAAGAAGGTCACATAATGCTCTCCGATTTTGATCTGTCACTGCGTTGCTCAGTCTGCCCTACCCTTGTTAAGTCCACATCATCTACTCATGTCAACGGTCTTTGTAATGGTTCTGCAGCCAATATCAGTGATGACAATGCAGTTCAGGGTTGCATGCAGCCATCGAGTTTCTTCCCACGAATTCTACCTTCGAAGAACAAGAACCGAAAATCGAAGTCCGATTTTGGACTATCTGTGGGAGGCCCCCTTCCTGAACTGATGGCAGAACCAACTAATGTACGTTCCATGTCGTTTGTGGGAACACATGAATATCTAGCTCCGGAAATCATTCGAGGTGAAGGGCATGGCAGTGCAGTAGACTGGTGGACATTTGGTATCTTCTTATATGAAATCCTTCATGGAACAACTCCATTCAAGGGTGCAGGAAATCGCGCAACACTATTTAATGTTGTTGGTCAGCCATTGAGATTTCCTGAAATTCCTCACGTGAGTTCATCAGCACGTGATCTTATCAAAGGGCTTTTGGTGAAAGAACCCCAGAAGAGATATGCATACAAAAGGGGTGCTACAGAAATCAAACAGCATCCCTTTTTCGAAGGAGTCAACTGGGCTTTAGTAAGAAGTGCCACACCTCCCCACATACCTGATCCTGTAGATTTTTTACAGTATGCTACCAAAGAATCATCCTCTACAGACAAGAAAACGACAGATCACGTTGCAGTTGATCATAAAAAACACAGTGGTAGTGGCCATGATTCCGCTTATGTAAATTTTGAGTACTTTTAG 1638 0.4328 MTNEPVNSVNVNQVKKSIISSAQNPTNHEPNITEQDLKTEADLRSPPFAEHQKPEAGSAKISSDSSGSTQGGNPSQRSMPPTPNYEAPTTTESSAKAMPTPTKTQSYRNRGSSPGSDTVSAPFKPHTGGDVRWDAINMVSKETPLNLSNFRLLKRLGYGDIGSVYLVELRGTKTHYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSHFETDKFNCLVMEFCSGGNLHSLRQKQPDKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVCPTLVKSTSSTHVNGLCNGSAANISDDNAVQGCMQPSSFFPRILPSKNKNRKSKSDFGLSVGGPLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYEILHGTTPFKGAGNRATLFNVVGQPLRFPEIPHVSSSARDLIKGLLVKEPQKRYAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDPVDFLQYATKESSSTDKKTTDHVAVDHKKHSGSGHDSAYVNFEYF* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01110 545 Gene3D Phosphorylase Kinase; domain 1 148 233 - -
Pte1g01110 545 Gene3D Transferase(Phosphotransferase) domain 1 234 301 - -
Pte1g01110 545 PANTHER FLIPPASE KINASE 1-RELATED 52 511 - -
Pte1g01110 545 ProSiteProfiles AGC-kinase C-terminal domain profile. 483 545 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte1g01110 545 MobiDBLite consensus disorder prediction 514 530 - -
Pte1g01110 545 MobiDBLite consensus disorder prediction 1 126 - -
Pte1g01110 545 FunFam serine/threonine-protein kinase D6PK-like 234 301 - -
Pte1g01110 545 FunFam Serine/threonine-protein kinase AGC1-7 375 500 - -
Pte1g01110 545 MobiDBLite consensus disorder prediction 511 530 - -
Pte1g01110 545 Gene3D Transferase(Phosphotransferase) domain 1 358 500 - -
Pte1g01110 545 CDD STKc_phototropin_like 148 503 - -
Pte1g01110 545 ProSiteProfiles Protein kinase domain profile. 150 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01110 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Pte1g01110 545 FunFam Serine/threonine-protein kinase D6PK-like 148 233 - -
Pte1g01110 545 SMART serkin_6 150 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01110 545 Pfam Protein kinase domain 358 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01110 545 Pfam Protein kinase domain 151 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01110 545 MobiDBLite consensus disorder prediction 33 49 - -
Pte1g01110 545 MobiDBLite consensus disorder prediction 1 32 - -
Pte1g01110 545 SUPERFAMILY Protein kinase-like (PK-like) 147 521 IPR011009 -
Pte1g01110 545 MobiDBLite consensus disorder prediction 58 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01110 Pte-Chr1 29903700 29905457 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte1g01110 Pkinase 1.1e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01110 1 29903700 29905457 Pte1g01110 1 29903700 29905457 RCT