Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00876 ATGGATTCCAGAACCCCAGTTGAGATCATGTCCAATCCGTCTACTCGTAATTCGTCATCAAGGAGGAGTGTTCTGTCCAATCCATCTAGAAATTCTGGTGGAAATTCCGTAAGGGAAGTGAGCTTTGGTGATTTCGCTGCCAAGTCTGTGAGATATGGGTCGAGAGGTCCTGGTTCTGAAGCTCTTAGCATGTCTGTAAAAGAAATTGACGAGGAGAATGCCAGACTGTTGTACATAAATGATCCTGATACGACGAATCAGAAATTTGAATTTGCTGGGAATGCAATTAGGACTACCAAATACTCTTTCTTGACTTTTGTGCCCAAGAATCTGTTTGAACAGTTTCATAGAGTTGCTTACATTTATTTCCTTATCATAGCTGTGCTTAATCAGTTGCCTCAGCTTGCTGTCTTTGGACGAGGAATTTCCATTCTTCCTTTAGCTTTTGTTCTACTCGTTACAGCTGTGAAAGATGCATATGAGGATTATAGGCGACATAGGTCAGACAGAGTTGAGAATAACAGATTGGCTTACGTTTTGGATAATAATGGTCAGTTCCAACAGAAGAGATGGAAGGATATTAGGGTGGGTGAAATCATTCAAATTCACGCGAATGAAACTATTCCATGTGATATTGTTTTGCTTTCGACTAGTGATCCAACTGGAGTAGCTTATGTGCAGACTATTAATTTAGATGGAGAATCCAATTTGAAGACTCGGTATGCAAAACAAGAGACTTTGACCATTATGATGCCAGGAAAGGATAGATTCACCATTGGAGGATCAATAAAGTGTGAGAAACCAAATAGGAATATTTACGGTTTTCAGGCTTTAATGGAAATGGATGATAAAAGACTTTCATTAGGGCCTTCTAATATTATTCTTAGAGGCTGTGAAATCAAGAATACTACCTGGGTTCTGGGAGTGGCTGTCTATGCAGGTAGTGAGACGAAAGCTATGCTCAACAGTTCAGGATCTCCATCCAAAAGGAGCCGTCTGGAGACCCGGATGAACTCAGAGATCATTATGCTCTCTGTGTTTCTTGTAACTTTATGTGCTGTCGTCTCTGTATGTGCTGCTGTTTGGTTAAGGCGCCATAGAGACAAATTAGATATCATGCCATTTTATAGGAAGGTAACCTTCGCTGACGGAAAGAAAGAAAGCTACAACTACAATGGATGGGGTGTAGAAATCTTTTTCACATTCCTCATGTGTGTCATAGTTTTCCAAGTCTTGATCCCAATAGCTCTGTACATTTCTATGGAGCTTGTTCGACTTTATCAGGCCTATTTTATGAGTCAAGATGCCCAAATTTATGATGAAGCATCCAATTCAAGATTTCAGTGCAGGGCTTTGAACATCAATGAAGATTTAGGACAAATCAAATATGTCTTCTCCGACAAAACTGGTACTCTTACAGAGAACAAGATGGTATTTCGGTGTGCAAGCATATGGGGTGTCAACTACAATGACGTGAAAGCCAGTTCAGAAAGTGAAGAATTTCAGCATTCTGTAGAAGTTGATGGGAAGGTTTTGCAACCTAAAGTGAAGGTGAATGTTGATCCAGCACTTGTGCAGCTGCCTAGACGTGGATATGAAAAGAAAGAGGCGAAACATGTTTGTGATTTCTTCATTGCATTGGCAGCTTGCAATACAATTGTCCCTATTGTCACGGATTCATCCGATCCTACAGTGAAGTTAATTGATTACCAGGGCGAGTCTCCAGATGAACAAGCATTGGTATATGCTGCCGCTGCCTATGGATTTGTCCTTGTTGAAAGAACATCAGGATACATAGTTATTGATGTTCTGGGAGAAAAGCAAAGGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGATCGGAAGAGGATGTCAGTTATACTTGGCTGCCCAAACAATACAGTAAAAGTTTTTGTCAAAGGTGCTGACACAACCATGTTTAGTGTGAGAGATAGATCTGTGAGTGTGGACATAATTCAAGCAACTGAAAGCCATCTTTACAAGTATTCTTCACTGGGTTTGAGAACGCTCGTTGTTGGAATGAGGGAACTGAACCATTCAGAATTTGAGCAATGGCAGTCTGGCTTTGAAGCAGCAAGCACTGCTTTATATGGTAGAGCTTCTTTGCTTCGCAAGGTGGCTGGGAATTTAGAAAATAGTCTGACCATATTGGGAGCCACTGCTATTGAAGATAGACTGCAACAAGGGGTGCCTGAATCAATCGAGTCCCTCAGAACTGCAGGGATTAAGGTGTGGGTATTGACTGGGGACAAGCAAGAAACTGCTATAGCAATTGGGTACTCTTCAAAGCTCTTGACAAGAAATATGACAAAGATAATAATTAACAGTAACAACAGGGAATCATGTAGAAGGAGTATAGAAGATGCTCTGGCCATGACAAGAAAACTCAAATCTGTCCCTGTGGTTCCAGATGATAGAGAAGTAAGTAGTGGGGTCAATGGATTCAGTACGAGTCCAGTGGCCTTGATCATTGACGGTACCAGTCTTGTTTACCTTCTCGACAGTGAATTTGACGAGAAGCTCTTCCAACTAGCAAGTAATTGTTTGGTGGTGCTGTGTTGTCGAGTTGCTCCTTTGCAAAAAGCCGGAATTGTGGCTCTTGTAAAGCACAGGACTTCTGATCTGACACTCGCTATTGGAGATGGTGCTAATGATGTTTCAATGATCCAAACTGCTGATGTTGGAGTTGGTATTAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTCGCTATGGGGCAGTTTAGGTTCTTAGTACCACTTCTATTGGTACATGGGCATTGGAACTACCAGAGGCTCGGTTATATGATATTGTACAATTTTTACAGGAATGCGGTACTTGTTCTTATCTTATTTTGGTACGTGCTTTTCACTTGCTTCACATTAACGACTGCTATCAGTGATTGGAGCAGCATGTTGTATTCTATCATTTACACTTCACTGCCAACCATAGTAGTGGGCATTCTGGATAAAGACCTTAGCAGAAGAACGCTCCTCAAATACCCTCAGCTTTATGGAGCGGGACATAGGCAGGAATGTTACAACAAAAAGTTATTTTGGTCGACAATGTTTGATACATTATGGCAAAGCATTGTCATCTTCTTTGTCCCTTTGTTAGCATATTGGGGAAGCGATGTGGATGTTACAAGCATTGGAGATTTGTGGACTATGGCAGTGGTGATTCTGGTTAATCTGCATTTAGCAATGGATGTGATACGGTGGAATTGGATTGTTCATGCAGTCATTTGGGGATCTATTCTTGCAACTTTCATTTGTGTGATTATCATCGACGCTTTGCCTACACTTCCTGGTTACTGGTATGCATTCTCTCACTCAAGCCCATGTTTTCATTTCAGATTTGCAACACTACAACCTAGTCTACCTGATCAATCTAATAGGGAAAAGGAATAA 3441 0.4121 MDSRTPVEIMSNPSTRNSSSRRSVLSNPSRNSGGNSVREVSFGDFAAKSVRYGSRGPGSEALSMSVKEIDEENARLLYINDPDTTNQKFEFAGNAIRTTKYSFLTFVPKNLFEQFHRVAYIYFLIIAVLNQLPQLAVFGRGISILPLAFVLLVTAVKDAYEDYRRHRSDRVENNRLAYVLDNNGQFQQKRWKDIRVGEIIQIHANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLTIMMPGKDRFTIGGSIKCEKPNRNIYGFQALMEMDDKRLSLGPSNIILRGCEIKNTTWVLGVAVYAGSETKAMLNSSGSPSKRSRLETRMNSEIIMLSVFLVTLCAVVSVCAAVWLRRHRDKLDIMPFYRKVTFADGKKESYNYNGWGVEIFFTFLMCVIVFQVLIPIALYISMELVRLYQAYFMSQDAQIYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMVFRCASIWGVNYNDVKASSESEEFQHSVEVDGKVLQPKVKVNVDPALVQLPRRGYEKKEAKHVCDFFIALAACNTIVPIVTDSSDPTVKLIDYQGESPDEQALVYAAAAYGFVLVERTSGYIVIDVLGEKQRFNVLGLHEFDSDRKRMSVILGCPNNTVKVFVKGADTTMFSVRDRSVSVDIIQATESHLYKYSSLGLRTLVVGMRELNHSEFEQWQSGFEAASTALYGRASLLRKVAGNLENSLTILGATAIEDRLQQGVPESIESLRTAGIKVWVLTGDKQETAIAIGYSSKLLTRNMTKIIINSNNRESCRRSIEDALAMTRKLKSVPVVPDDREVSSGVNGFSTSPVALIIDGTSLVYLLDSEFDEKLFQLASNCLVVLCCRVAPLQKAGIVALVKHRTSDLTLAIGDGANDVSMIQTADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVLILFWYVLFTCFTLTTAISDWSSMLYSIIYTSLPTIVVGILDKDLSRRTLLKYPQLYGAGHRQECYNKKLFWSTMFDTLWQSIVIFFVPLLAYWGSDVDVTSIGDLWTMAVVILVNLHLAMDVIRWNWIVHAVIWGSILATFICVIIIDALPTLPGYWYAFSHSSPCFHFRFATLQPSLPDQSNREKE* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00876 1146 MobiDBLite consensus disorder prediction 1 37 - -
Pte1g00876 1146 FunFam Phospholipid-transporting ATPase 149 322 - -
Pte1g00876 1146 SFLD p-type atpase 449 938 IPR044492 -
Pte1g00876 1146 ProSitePatterns E1-E2 ATPases phosphorylation site. 467 473 IPR018303 -
Pte1g00876 1146 Pfam E1-E2 ATPase 177 423 - -
Pte1g00876 1146 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 1128 IPR023298 -
Pte1g00876 1146 SUPERFAMILY Calcium ATPase, transduction domain A 175 319 IPR008250 -
Pte1g00876 1146 SFLD C1.7: P-type atpase like 449 938 - -
Pte1g00876 1146 Pfam Phospholipid-translocating P-type ATPase C-terminal 915 1115 IPR032630 -
Pte1g00876 1146 CDD P-type_ATPase_APLT_Dnf-like 93 1047 - -
Pte1g00876 1146 Pfam Cation transport ATPase (P-type) 569 648 - -
Pte1g00876 1146 SUPERFAMILY HAD-like 452 928 IPR036412 -
Pte1g00876 1146 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 76 1119 - -
Pte1g00876 1146 PRINTS P-type cation-transporting ATPase superfamily signature 465 479 - -
Pte1g00876 1146 PRINTS P-type cation-transporting ATPase superfamily signature 887 906 - -
Pte1g00876 1146 Gene3D - 565 702 IPR023299 GO:0000166
Pte1g00876 1146 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 471 736 IPR023299 GO:0000166
Pte1g00876 1146 Gene3D - 150 323 - -
Pte1g00876 1146 NCBIfam HAD-IC family P-type ATPase 859 973 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00876 1146 NCBIfam HAD-IC family P-type ATPase 142 254 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00876 1146 NCBIfam HAD-IC family P-type ATPase 397 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g00876 1146 Gene3D - 721 927 IPR023214 -
Pte1g00876 1146 FunFam Phospholipid-transporting ATPase 721 927 - -
Pte1g00876 1146 FunFam Phospholipid-transporting ATPase 569 702 - -
Pte1g00876 1146 NCBIfam phospholipid-translocating P-type ATPase 91 1127 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte1g00876 1146 Pfam Phospholipid-translocating ATPase N-terminal 78 143 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00876 Pte-Chr1 17238501 17244266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00876 38 1119 Primary Pumps ATPases AT5G04930 70.756 0.0 1613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00876 1 17238501 17244266 Pte1g00876 1 17238501 17244266 RCT