Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00597 ATGGATAATGTTAATCAAACCTCACAGGAGGTTGAAGTAGTGAGATCTATGGAAGGGTTAACTCCAAGTTCATGCCCAGGGCCTATGTTAGAGAAGAAGACAAAACCAAAGGAGCAGTTGAATTGTCCAAGATGCAATTCCACCAACACCAAGTTCTGCTATTACAACAATTACAGTCTCACACAACCAAGATACTTCTGCAAAACTTGCAGAAGATACTGGACTGAAGGTGGGTCTCTCAGAAATGTTCCAGTTGGGGGTGGTTCCAGGAAAAACAAGAAAGCAATAACAGCATCATCTTATTCAACGTCAGTATTGTCTTCATCACCATTGAAGATTCCTGAACTAAACCCTCCAAACCTCACACCTATTGCTTCTCAAAACCCCAAGTCTCAGGCTGGTCAATATCTTAATCTGGCATTCCCATCTATGGAGAATTATCATGGCACACCCCACTATGTTCATGAGGTGCCAAAGCTAGAAAACAGTAACAGTATTCATCATCATGAGAACTCTTGTTCAAATTCATCTTCTTTTTCAGCTCTGGAGTTACTGAAGCCTGGGATGGTGTCTAGGGGTTTGATTCCTTATATTCCAACACTGATGCCTGAGTCAGATCATACACTTTACCCCGCAGCAGGGTTTCTACCACAAGAGCTGAAACCAGCCCTTGATTTTTCCGTTGATCATGGGATAGGAAATAGGTATGCTGTTCAAGAAAACAATGTAAGGCATGTGTTTCCTTTTGCAGAAATGAAGAATCTTTCAGCTTCAAATGACGTAGAGCACCATAAAGAACAACCAAGTTCAATTGGGTATTGGAATGGTTTGATGGGTGAAGGATCGTGGTAA 852 0.4167 MDNVNQTSQEVEVVRSMEGLTPSSCPGPMLEKKTKPKEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKAITASSYSTSVLSSSPLKIPELNPPNLTPIASQNPKSQAGQYLNLAFPSMENYHGTPHYVHEVPKLENSNSIHHHENSCSNSSSFSALELLKPGMVSRGLIPYIPTLMPESDHTLYPAAGFLPQELKPALDFSVDHGIGNRYAVQENNVRHVFPFAEMKNLSASNDVEHHKEQPSSIGYWNGLMGEGSW* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00597 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 169 IPR045174 GO:0003700|GO:0006355
Pte1g00597 283 MobiDBLite consensus disorder prediction 18 40 - -
Pte1g00597 283 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Pte1g00597 283 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Pte1g00597 283 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00597 Pte-Chr1 7574118 7575519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00597 29 284 C2C2-Dof Transcription Factor Family AT3G61850 46.595 1.33e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte1g00597 zf-Dof 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00597 - - pop:7497268 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g00597 1 7574118 7575519 Pte1g00597 1 7574118 7575519 ECH