Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g00430 ATGCAAGACCCGGCGACTTTTCCACCATTGAAGCCTCCATTTCCAGAGCAAGAGCAACTCAAGTGTCCCCGCTGTGATTCCACAAACACCAAATTCTGTTACTACAATAACTACAATCTTTCACAGCCTCGCCATTTTTGTAAGAACTGCAGGAGGTACTGGACTAAAGGTGGTATTTTGCGAAATGTTCCTGTTGGAGGAGGCAGCAGGAAGAACGCAAAGAAGACATCGGCCAAAAAGGGTTCTTCTTCATCGTCGTCTTCACCCTCGTCCTCATCTTCCTTACCTTTAGAACCAGCCCCCACAGCTCAGACTACAGTTCCCGATCTTAATCCGGCCCGCGCACAAAGTAATGCAGTTGATCAGGAGAAGCGGGTCGTGGATATCAGCGGGAGCCTTAGTTCACTTGTTGGTTCAAGTGGTCCTTTTGGGAGTCTCTTGGAGGGTCTTAATTCAAACGGGGGCGTGAAAGGTTTGTCAATCAATGCAATGGGTGATAGTCTGAACTCGGATCCATTGGAGAATTCTGGTGTGGGTCGGAACACAATGCAGGTGCAGAGTAATACCAATTCAGAGAGTTTTCTTGGTATGCAAATTGGTGGTTCAACCTGTTGGAATGATGGCAGTGAGTGGTCTGGTCTGACAATTTACTCGTCAGGTTTAAGTTTATCAGTAGAAGCAGAGAGAGAGAAGGCAAATTATTTAGCTTAA 711 0.4655 MQDPATFPPLKPPFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGILRNVPVGGGSRKNAKKTSAKKGSSSSSSSPSSSSSLPLEPAPTAQTTVPDLNPARAQSNAVDQEKRVVDISGSLSSLVGSSGPFGSLLEGLNSNGGVKGLSINAMGDSLNSDPLENSGVGRNTMQVQSNTNSESFLGMQIGGSTCWNDGSEWSGLTIYSSGLSLSVEAEREKANYLA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g00430 236 MobiDBLite consensus disorder prediction 78 118 - -
Pte1g00430 236 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 167 IPR045174 GO:0003700|GO:0006355
Pte1g00430 236 MobiDBLite consensus disorder prediction 1 20 - -
Pte1g00430 236 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Pte1g00430 236 MobiDBLite consensus disorder prediction 1 16 - -
Pte1g00430 236 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Pte1g00430 236 MobiDBLite consensus disorder prediction 61 122 - -
Pte1g00430 236 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g00430 Pte-Chr1 4694623 4697908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g00430 11 86 C2C2-Dof Transcription Factor Family AT1G51700 78.947 8.14e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte1g00430 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g00430 - - gmx:100790822 211.46