Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01164 ATGTCACTGACGCGGTCATCAGGCTTTGAGTATTTCATTCTTGTCCTTGTTTCGTTCGTTCTTGGATTTCATGTTTCTGCCACATCGGCTACGTCACTAGATTCTTACTATGAGCCTTTTCTTCAATACCTAAAAAGTCAAGGCAACTCATTAGACCAAGTGTCGACTATAGTTTATGCCAAGACATACAATATTTCTCCATACACCTCAGTTCTTAGAAATTATATCCGTAATGCTAGGTTCAACACCAGTTCAACCCCAAAACCTGAAATCATTCTGACTCCACTGCAAGAATCCCATGTGCGATCAACTGTTACTTGTGCCAAAAAAGTTGGGATTCAAATCAGAATCCGCAGTGGAGGCCATGATTTCGAGGGTCTCTCGTACATTTCTGATCAACGGTTTATTATTCTAGACATGTTTAATTTGAGGAACATCACTGTTGATATTGCCACTGAGACAGCGGTAGTTCAGCCTGGTGCTACTGTTGGGGAACTTTATTACAGCATTTGGAAGAAGAGTAAAGTTCATGGCTTTCCTGCTGGGGTTTGCCCCACTGTTGGTATTGGTGGCCATTTTACTGGTGGGGGCTATGGAAATATGCTGCGTAAGTATGGTCTTTCTGTTGATCACATCATTGATGCTCAGATTGTTGATGTTCATGGTAGAATTCTCAATAGGGAATCCATGGGTGAAGACCTTTTCTGGGCAATTAGAGGAGGAGGAGGAGCCAGTTTTGGAGTTGTAATATCTTATACAATCAAGTTGGTGCCTGTTCCTGAGATTGTTACAGTCTTTCGTATCGAAAGGAGTCTTGAAGAGAATGCCACTGATGTTGTATATCAATGGCAGCAGGTTGCTCCGAATACAGATGACAGGCTATTTATGAGGATGCTTATTCAGCCTGTGACTTCAAAGGTGAACAAAGGGCATAAAACAATAAGAGTCTCAATTATCACAGAGTTTCTTGGAGGGGCTGAAGAACTTGTTGGATTGCTGGAAAAGGATTTTCCTCAACTGGGCCTGAAAGCAGAGGACTGTAAAGAGATGAGTTGGATAGAATCTGCTTTGTGGTGGGATAGTGACAGTAACCCCATGAAGCCAGAGATTTTGCTGGACAGAGATCTTGACTCTGCAAATTTCTTGAAAAGGAAATCTGATTATGTCCAGACACCAATTCCTAAAGATGGATTGGATGAGATATTCAAGAAGATGATTGAGTTGGGAAAGACAGGCTTTGTTTTCAACCCATATGGTGGGAGAATGAGTCAAATCCCTGCTTCTGATGTACCCTTTCCTCACAGGGCTGGCAATTTGTACAAAATTCAGTACTCAGTGAATTGGGACGATGAGGGGGCTGATGCAGAGAAGAACTATTTATCTCAAGTTCGAAGTTTGTATAGTTATATGACCCCATTTGTGTCTAAGAACCCAAGGTCTGCTTTCTTAAATTACAGGGATCTTGACATTGGCATCAATCATCATGGTGGCAATAGCTACCAAGAAGGGAAGGTTTATGGCACTAAGTACTTCAATGACAATTTTGATAGATTGGTGAAGGTCAAGACAGCAGTTGACCCTGAGAATTTCTTCAGGAACGAGCAAAGTATTCCAGTAAATCCAAGTGCGCAGTCGTCACGTGCTGGAAAATTAGGATGGTCCAGTTTGACGAAGTTAACGACTGGAGGGCTGATATCCCTGTTTATTGTTCGTGATTTGGTTAGATTTTTCTCTTACGGAGTGAACTGA 1749 0.4191 MSLTRSSGFEYFILVLVSFVLGFHVSATSATSLDSYYEPFLQYLKSQGNSLDQVSTIVYAKTYNISPYTSVLRNYIRNARFNTSSTPKPEIILTPLQESHVRSTVTCAKKVGIQIRIRSGGHDFEGLSYISDQRFIILDMFNLRNITVDIATETAVVQPGATVGELYYSIWKKSKVHGFPAGVCPTVGIGGHFTGGGYGNMLRKYGLSVDHIIDAQIVDVHGRILNRESMGEDLFWAIRGGGGASFGVVISYTIKLVPVPEIVTVFRIERSLEENATDVVYQWQQVAPNTDDRLFMRMLIQPVTSKVNKGHKTIRVSIITEFLGGAEELVGLLEKDFPQLGLKAEDCKEMSWIESALWWDSDSNPMKPEILLDRDLDSANFLKRKSDYVQTPIPKDGLDEIFKKMIELGKTGFVFNPYGGRMSQIPASDVPFPHRAGNLYKIQYSVNWDDEGADAEKNYLSQVRSLYSYMTPFVSKNPRSAFLNYRDLDIGINHHGGNSYQEGKVYGTKYFNDNFDRLVKVKTAVDPENFFRNEQSIPVNPSAQSSRAGKLGWSSLTKLTTGGLISLFIVRDLVRFFSYGVN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01164 582 Gene3D - 262 477 - -
Pte19g01164 582 Pfam Berberine and berberine like 481 538 IPR012951 GO:0016491|GO:0050660
Pte19g01164 582 Gene3D - 147 538 IPR016169 -
Pte19g01164 582 Gene3D - 36 143 IPR016167 -
Pte19g01164 582 PANTHER OS08G0158400 PROTEIN 35 539 - -
Pte19g01164 582 FunFam Berberine bridge enzyme-like 15 35 143 - -
Pte19g01164 582 SUPERFAMILY FAD-binding/transporter-associated domain-like 38 260 IPR036318 GO:0050660
Pte19g01164 582 Pfam FAD binding domain 89 225 IPR006094 GO:0050660
Pte19g01164 582 ProSiteProfiles PCMH-type FAD-binding domain profile. 85 259 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01164 Pte-Chr19 15151771 15155006 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01164 19 15151771 15155006 Pte19g01164 19 15151771 15155006 RCT