Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00179 ATGACTCTTGAAGAATTATTGGCAAATCCCACATCAGATCAGATACTAGACTGGCTTGGACTGGGAGAGTCAGTTTCATTGCTTCCATCATTGCTGGATGATCCATACAATCCAGATGATATTAACAATTGCCAATGGTGGAGTCAAACGCAAGACATAGCTCAGGCTCTAATTAGTAGTGCAGGTACCACTTGTACAAATAACACCAACTGTCTTGCCACCCTTAACGCCATAACACCGAACAAGACCAACATTTCTAATCACATACCATGTTCTGACTTATCTAATAAGAAACGAAAAATCTGTGATAACCCTTCATTGACACCTTCCCAAACTCAGCAACAGAAGAGAAATCAGAGCCGGAAGGCAATTGAAGCTGCTGATTGTGGGGAAGGAACAGTTGGACTTAAAAAGTCAGTGAAGAAAGGTGCTGGCAAGGGCAATGGAAACAACGGTAATAACAAAGAAAGCAGGTGGGCAGAGCACTTGCTCAACCCTTGTGCTGCAGCCATCACTGCAGGTGACCAGAGCCGAGTGCAACACTTTCTATATGTTCTTCATGAGCTAGCATCCACAGCTGGTGATGCCAATCATAGGCTAGCTGCTTATGGTCTAAGAGCACTGAAATATTACCTGTCTTCAAACTCACCTGCCTTAGCTGGCAGCTTTGTTTCTACAGAGCCGAGGTTCTTTCAGCGATCTTTGATGAGGTTTGACGAGGTCAGTCCCTGGTTTGCCTTGCCGAATAACATTGCAAATTCTTCAATACTTCAAATCCTTGCTAAGGAACAGCGAAAACATTCTCATAGTGTTCTTCACATCCTTGATATTGGAGTCTCGCATGGTGTGCAATGGCCAACACTACTAGAGGCCCTAACACGCCGACCTGGGGGTCCTCCTTCATTAGTTCGTCTAACTGTTGTTGCTGGTAGCACTGAGAACGGCCAAAACACTGAGACCCCGTTTTCGAAAGCTCCAACAGGTGTCAATTTCTGCGCTGCGCTCCTGAGTTTTGCGAAGTCCATGAACATCAACCTGCAGATAAACAGACTCGATAACCAGCCATTAAAAAATTTAACTTCCGAAATGATCAAGACATCCACTGATGAAACTTTGATCATCTGCGCACAGTTTCGACTACACCACCTGAATCCTAATGTGCCTAATGAAAGAACAGAGTTCTTGAAAGTCCTGAGGAGTATGGAACCAAAAGGGGTCATACTATGCGAGAACAACATGGAATGTACGTGCAGTAGTTGTGGGAAATTCGTTACCAGCTTTTGCAGGAGAGTAGAGTACTTATGGCAATTTCTAGACTCGACAAGCTCAGCATTCAAGGGGAGGGAAAGCGAGGAAAGGAAGATGATGGAAGGAGAGGCAGCAAAAGCATTGACAAGCCTCGGCGAAATGAATGAAAGAAAAGAGAAATGGTGTGAAAGAATGAAAAGTGCAGGATTCACACCTGAGATGTACGGGGAGGATGTCATTGATGGGGCTAGAGCTTTGTTGAGGAAGTATGACAGCAATTGGGAAATGAGATCTGATACGAATGATATGTGCGTAGGGCTATGGTGGAAAGGTCAGACTGTATCTTTCTCTTCATTGTGGAAGTCAGATATCTAA 1623 0.4442 MTLEELLANPTSDQILDWLGLGESVSLLPSLLDDPYNPDDINNCQWWSQTQDIAQALISSAGTTCTNNTNCLATLNAITPNKTNISNHIPCSDLSNKKRKICDNPSLTPSQTQQQKRNQSRKAIEAADCGEGTVGLKKSVKKGAGKGNGNNGNNKESRWAEHLLNPCAAAITAGDQSRVQHFLYVLHELASTAGDANHRLAAYGLRALKYYLSSNSPALAGSFVSTEPRFFQRSLMRFDEVSPWFALPNNIANSSILQILAKEQRKHSHSVLHILDIGVSHGVQWPTLLEALTRRPGGPPSLVRLTVVAGSTENGQNTETPFSKAPTGVNFCAALLSFAKSMNINLQINRLDNQPLKNLTSEMIKTSTDETLIICAQFRLHHLNPNVPNERTEFLKVLRSMEPKGVILCENNMECTCSSCGKFVTSFCRRVEYLWQFLDSTSSAFKGRESEERKMMEGEAAKALTSLGEMNERKEKWCERMKSAGFTPEMYGEDVIDGARALLRKYDSNWEMRSDTNDMCVGLWWKGQTVSFSSLWKSDI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00179 540 MobiDBLite consensus disorder prediction 105 120 - -
Pte19g00179 540 ProSiteProfiles GRAS family profile. 151 537 IPR005202 -
Pte19g00179 540 Pfam GRAS domain family 161 537 IPR005202 -
Pte19g00179 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 131 526 IPR005202 -
Pte19g00179 540 MobiDBLite consensus disorder prediction 105 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00179 Pte-Chr19 1408675 1410297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00179 1 537 GRAS Transcription Factor Family AT3G13840 48.812 4.19e-160 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte19g00179 GRAS 4.5e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00179 - - qsa:O6P43_018403 682.559