Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01496 ATGGAGAGAGCATGGAAGCCTAACGTAGAGGTGTCACCCCATTGTCCTAGGTGTGGTTCTTCCAACACAAAATTCTGCTATTACAATAACTACAGCTTAACACAGCCAAGATACTTTTGCAAGGGCTGTAGGAGGTACTGGACCAAAGGCGGATCCCTACGCAATGTGCCAGTTGGTGGTGGTTGCCGGAAGAGCAGAAAGAACAGCAAGATTTTCAGGTCATCATCGTCAAATGGTTTCAGGGGCTTAGCTTATAGTGGTATTGCACATGCCCCAATGGTGCAACACATGGGCAGCAGTAGTACTGGGAATTCTGCAATAGAGCCCACTAGCTCATCGATGATGTCTGATGGTTCAAACATTGATCTTGCTCTTGTATTTGCGAACTTCGTAAATCAAAAACCAGAGGTGTCAAATACAAGGAGAGATTATGAGAAGCCAGAATTGTGTTCTGAGAGTTGTCACATTCCTCGTGGTGTAGAGTATTCAAGCTTAACCGATACAAATGTTGGCTTGAGTTGTACTTTACCAGAAGACATCGGTGCATACGAGGGCCGTCCTCATTATGGGCAGTCTAAAGAGTCCCAATTCCAAGGGGTTGATCAGACGTTCCTCAGTGGACTTAGCTCATTTCAGAAACATCAACATAGAATCGAGCAGTACACCACTAGTTACGACGGCATGATCCATTTGGAGTTGCCGCCTTTGCCTGGGGAGGAAGCCTCACAAGAATTAATGTGGTCCAATTCTGAGTTGATGCTAAACCATGGAGTCCCACCTGCACACTCGCCAATGCTTGACCATGAAGTCCAAGATGCAGACTTGTTGATTGGTAATTGGAGTCCATTTGATCTGTGCAAAGATGATCTTTTTCCCAAACCATTATAA 888 0.4527 MERAWKPNVEVSPHCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRKNSKIFRSSSSNGFRGLAYSGIAHAPMVQHMGSSSTGNSAIEPTSSSMMSDGSNIDLALVFANFVNQKPEVSNTRRDYEKPELCSESCHIPRGVEYSSLTDTNVGLSCTLPEDIGAYEGRPHYGQSKESQFQGVDQTFLSGLSSFQKHQHRIEQYTTSYDGMIHLELPPLPGEEASQELMWSNSELMLNHGVPPAHSPMLDHEVQDADLLIGNWSPFDLCKDDLFPKPL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01496 295 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Pte18g01496 295 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Pte18g01496 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 189 IPR045174 GO:0003700|GO:0006355
Pte18g01496 295 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01496 Pte-Chr18 26551962 26552849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01496 1 288 C2C2-Dof Transcription Factor Family AT3G52440 38.854 1.57e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte18g01496 zf-Dof 4.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01496 - - qsa:O6P43_006030 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01496 18 26551962 26552849 Pte18g01496 18 26551962 26552849 ECH