Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01037 ATGTGGGGTGCGAAAGACCCGGCCATCAAGCTCTTCGGTACGACGATTCAGTTACCAGAGATCCTAGCTCGATCTGAAGACTCTATGGGAGTTATAACAAATTCTTCTTCTGGGCCTGCTTTGGTAAATGATGATAACGGTTCCAATCATACTTCCTCCACTAACTCTTCAGCTGATGAGTGCCATGGAGGCTCAGGCTCCCCAGACATTTACAAGGTATATATTAAGGATTTGGGCGAAAGGACCACTGATTCCAAGATCGAAGATGGAGGCCCTACTATATCTTCAGAAGAGATCATCAACCCTGATGTGGGTTCATCCATAGAGGAGAACTCCAGTTCTCCCTCTTTTGAGGATATTTCTGCATCAAAAAGTTCAAGGACTCTTGAAGAACAAAAGGAAATGAATGATTCGCAAGACAAAACTCCAAAGAAACCAGACAAGATACTTCCATGTCCCCGGTGTAATAGCATGGAAACCAAATTCTGTTACTACAATAATTACAATGTCAATCAACCTCGACACTTCTGCAAGAACTGCCAGAGGTACTGGACAGCAGGTGGGACTATGAGAAATGTGCCTATAGGTGCTGGTCGTAGAAAGAACAAGGCTTCTGCTTCCCATCAACATCAACTAGCTGTCTCTGAAATTTTTCAGAATGCTCAAACCGGCTTATCAAATAGCAAACATCCTTCTTTGGAACCTAATTCCGTGGTTCTCACTTTTGGTACTCACACCCCCCTTTGGGAATCGATGGCATCTGTTTTGAATGTTGCAGACAAATCAGCGCAGGACTGCATAAGAAATGGATTTCGCAAACCTGAAGAACTCAGAATTCCCATATATATCAATGGAGAAAATGGCATTGACCAATTTAGTAAACCTTCTAAGTCAAAGGATGCTGCAAATAGTGCCATGTCACAAGAACAATTACTGCAGAGCTTCTTACCTCAGATCCCTTTGTTTACTGCGCCTTGGCCTTTCCCATCAACTGCATCACAGTTGAATCCACCAGTGACACCAACAACCTTATGCCCTCCAGGATTTGCTGTGCCACCATATCCTGCGGCTTATTGGGGTTGTGCTGCGTCACACACTTGGAATGTCCCATGGTTGTCCCGGCAATGGTCTCCGAAAGACGCTAGCTCTTCCTCACCATCCTTGGGTAAACATTCGAGGGAAGAGAACGTGCCCAAACCAAATAATTCTGAGGGATTGGACGAGCATGTAATAGAAAAAAGTGAAGAGAAAAACCTTTGGGTACCTAAAACATTGAGGGTCCATGATCCCAGAGATGCAGCAAAGAGCTCTATATGGAGAACACTAGGTATTCAAAATGATATGGCTGACACAGTTAGGGGCGTGCAACTCTTTAAGGGATTTGTATCAAAGGATGAAAAAATTAATTTACGGGGAACCTCACATGTTCTACAGGCCAATCCAGCAGCACTGTCTAGGTCGCTCAACTTTCATGAAACCGCTACATGA 1488 0.4415 MWGAKDPAIKLFGTTIQLPEILARSEDSMGVITNSSSGPALVNDDNGSNHTSSTNSSADECHGGSGSPDIYKVYIKDLGERTTDSKIEDGGPTISSEEIINPDVGSSIEENSSSPSFEDISASKSSRTLEEQKEMNDSQDKTPKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKASASHQHQLAVSEIFQNAQTGLSNSKHPSLEPNSVVLTFGTHTPLWESMASVLNVADKSAQDCIRNGFRKPEELRIPIYINGENGIDQFSKPSKSKDAANSAMSQEQLLQSFLPQIPLFTAPWPFPSTASQLNPPVTPTTLCPPGFAVPPYPAAYWGCAASHTWNVPWLSRQWSPKDASSSSPSLGKHSREENVPKPNNSEGLDEHVIEKSEEKNLWVPKTLRVHDPRDAAKSSIWRTLGIQNDMADTVRGVQLFKGFVSKDEKINLRGTSHVLQANPAALSRSLNFHETAT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01037 495 ProSitePatterns Zinc finger Dof-type signature. 152 188 IPR003851 GO:0003677|GO:0006355
Pte18g01037 495 Pfam Dof domain, zinc finger 147 204 IPR003851 GO:0003677|GO:0006355
Pte18g01037 495 MobiDBLite consensus disorder prediction 82 147 - -
Pte18g01037 495 PANTHER CYCLIC DOF FACTOR 2 5 493 IPR045174 GO:0003700|GO:0006355
Pte18g01037 495 MobiDBLite consensus disorder prediction 99 123 - -
Pte18g01037 495 ProSiteProfiles Zinc finger Dof-type profile. 150 204 IPR003851 GO:0003677|GO:0006355
Pte18g01037 495 MobiDBLite consensus disorder prediction 33 62 - -
Pte18g01037 495 MobiDBLite consensus disorder prediction 378 408 - -
Pte18g01037 495 MobiDBLite consensus disorder prediction 392 408 - -
Pte18g01037 495 MobiDBLite consensus disorder prediction 124 147 - -
Pte18g01037 495 MobiDBLite consensus disorder prediction 33 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01037 Pte-Chr18 22793444 22796523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01037 6 494 C2C2-Dof Transcription Factor Family AT5G39660 40.519 5.03e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte18g01037 zf-Dof 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01037 - - jre:108985974 520.776