Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00838 ATGAATTTCGTTTCCTTAGCTCTGAAGTTTATCGTGATCGTGTCATTCACTACGACGTCGTATAGATTGGAGTCTGAAGTTATTATAAAATGGAAATGCATCATCCAGAGAACATCGTTCATGGTATACGTCGAACTGATTTGGAAAAGCTCAACTTGTTCGGTCTCCTGGAAGAGCTGTCGGCGTTACTGGACTAGTAAAGGTGCACTGAGAAATGTTCCAGTTGGAGGTGGGTGTAGAAGGAACAAAAGGAGCAGCAGAAAAAGCAGTAGATCAAAATCTCCATCTACGATACAGCCTCATCAAGCTGCTTCAGCCTTCACCAGATCTAACTATTCAACCATTTGCACCCAAGATGGTACGATGAACCATTTACCACGGCATACACCATCACAGCTTCAATTGTCATGTCTGTCTCCTTTTCAGAATATTTCTGATTACGTGACTGGAGACATGCAATTAAGTTTTGGTTCAACTAGAGCTCCAATGGCAGTGGCCAGCGGAAAAACTGGTGGCGGTAATGTCAACTTTCAGAATGGCAGCGATAGTAGACCAATATTGTCAAATATTTTTACAGAGGTATGGAGGTCACCTCAGATGGAGCAAGTATATGATCGATTGTCTCAGCAACAGCTTCTTGAACCTTCCATTAGTTTACTTCCTTATGAAGGCAGAAATATTGAGCCACCAAGATTTGTCGAAAAGGGTAGTGATCTTCGGTTTAATAAGGCGTTGGATTTGAGTGCTAGTGGAAATCCTCAGCAGGCTATGGTTAAATCGGAAGAAAATCAAAATCAAGGGCGGAAAGTATAA 813 0.4194 MNFVSLALKFIVIVSFTTTSYRLESEVIIKWKCIIQRTSFMVYVELIWKSSTCSVSWKSCRRYWTSKGALRNVPVGGGCRRNKRSSRKSSRSKSPSTIQPHQAASAFTRSNYSTICTQDGTMNHLPRHTPSQLQLSCLSPFQNISDYVTGDMQLSFGSTRAPMAVASGKTGGGNVNFQNGSDSRPILSNIFTEVWRSPQMEQVYDRLSQQQLLEPSISLLPYEGRNIEPPRFVEKGSDLRFNKALDLSASGNPQQAMVKSEENQNQGRKV* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00838 270 MobiDBLite consensus disorder prediction 248 263 - -
Pte18g00838 270 Pfam Dof domain, zinc finger 58 84 IPR003851 GO:0003677|GO:0006355
Pte18g00838 270 MobiDBLite consensus disorder prediction 248 270 - -
Pte18g00838 270 MobiDBLite consensus disorder prediction 75 103 - -
Pte18g00838 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 58 176 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00838 Pte-Chr18 20777695 20779123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00838 58 173 C2C2-Dof Transcription Factor Family AT3G55370 37.069 2.71e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte18g00838 zf-Dof 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00838 - - qsa:O6P43_005680 131.339