Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00645 ATGGACACAGCCCAGTGGGCACAGGGGATTGGAGTGGTTAAACCTATGGAAAGTTCAAGGTCTGCTGTGCTGGAAAGGAAAACCAGACCTCCTAAAGATCAGGCTTTGAATTGTCCTAGGTGCAATTCAACAAACACTAAATTCTGCTACTACAACAATTACAGTCTCTGTCAGCCTAGATACTTCTGCAAAACCTGTAGAAGGTATTGGACTGAGGGAGGGTCTTTGAGAAATGTTCCTGTAGGCGGTGGTTCAAGAAAAAATAAGAGAGGATCAGCCTCATCAGCAGCAGCTGCAGCAAACGCAACAGCTCCATCACCTAAGAAGCTTAGTAGTAGTACTACTGATCAACTCACAGTCCCGGTCTTCCTTTCACAGTCTGCACCTCAAAGTTCTAAGATCCGCACAAACCAGCAAGATCTCAACTTAGCATGCCCACCAGTTGATCATCAGGACTACAATGCTTTATCTAAATTTGTTGATGTGCCCTATGGCAGTACTGACGATAAGAGCCAATTTCAGAACCCTAACTCCTCATCGGTAACATCTCATCAGTCTCAGTTAACATCTATGGATCTCCTCAAGAATGGGATTGCTTCTAGGGGCTTAGGTTCTTTCATGGGATTGCCGGCATCTGATCAGTCTAGTACAATGTACTCAGATGGATATTCTTTGCAAGACTTCAAGCCAAGCCTAAATTTCTCTTTGGAGGGATTTGAAAATGGGTATGGGAGTCTCCAAGGGATGCAAGAGGGTACAGGTGCAAGGCTTTTGTTCCCAGTGGAGGAATTGAATAAGCAAGTTGATGACTCAACTGGGTTTGGCCAAAATAGAAGCCAAGCAGCAGATCAAGCAAGTGGGTATTGGAATGGAATGTTAGGAGGGCCATGGTAG 894 0.4497 MDTAQWAQGIGVVKPMESSRSAVLERKTRPPKDQALNCPRCNSTNTKFCYYNNYSLCQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRGSASSAAAAANATAPSPKKLSSSTTDQLTVPVFLSQSAPQSSKIRTNQQDLNLACPPVDHQDYNALSKFVDVPYGSTDDKSQFQNPNSSSVTSHQSQLTSMDLLKNGIASRGLGSFMGLPASDQSSTMYSDGYSLQDFKPSLNFSLEGFENGYGSLQGMQEGTGARLLFPVEELNKQVDDSTGFGQNRSQAADQASGYWNGMLGGPW* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00645 297 Pfam Dof domain, zinc finger 33 90 IPR003851 GO:0003677|GO:0006355
Pte18g00645 297 MobiDBLite consensus disorder prediction 88 115 - -
Pte18g00645 297 MobiDBLite consensus disorder prediction 78 115 - -
Pte18g00645 297 MobiDBLite consensus disorder prediction 167 187 - -
Pte18g00645 297 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Pte18g00645 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 187 IPR045174 GO:0003700|GO:0006355
Pte18g00645 297 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00645 Pte-Chr18 17279080 17281585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00645 1 297 C2C2-Dof Transcription Factor Family AT4G24060 39.655 5.46e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte18g00645 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00645 - - qsu:112023740 322.783