Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00836 ATGATTTTCTCGTCACTTCCGGTCTATTTAGATGCTCTTAATTGGCAACGGCAACTTCAAGAGAATTTCGGTACTGAAAATTATGATCATCATCAGTTGCTTCCACCACTCTATCCAAAAGATCATCATGTTGCTGGGGGTGCTGCCGGCTCAATCAGACCAGGAACGGTGGCCGATCGAGCTCGGCAAGCCAAGGTTCCACTGCCGGAGGCTGGTCTGAAGTGTCCAAGGTGTGAATCTACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTTTCTCAACCCCGCCACTTCTGCAAGACATGCCGGCGTTACTGGACTAGAGGCGGCGCTCTTAGAAATGTCCCTGTCGGTGGAGGGTGCCGAAGAAACAAGAACACCAAAAAGAATTGCTCAAAATCTGCAGCAGTCAATGATGGACGGACCATTTCGAATACTAATGGCATTGAGAATACTGCAGCCTCCCGCACCTGTACTAGTGAGCTTATTTGTCCATTGCTGCAACCAGATCTTATGGCGTCTATACAAAATATTAATAGTCGTGGAGTTGGGAATATGGGGCCGAATTCAGGAGCTGAGAAAGAAACACATACTGACCCTTTTGGCCGTGTGATCAGCTTAAAAGCTTTATGTGGTGCAGGAGTAGACCAACAATGGTGTTTGCAGCAGTTCCCTTCGCTGACATCTGCTGCTTCCTATCCATTTCAAAGTGGTTGTGTTGAAGCACCTTCTGCTTTGGCTTTGACAAGTAATGACCCACTGGGTATTCTGTCATCGAGTTCTACTACACCTAGGGTTATTACTGATCAGTTGCCCCCAGCTAAATTCGAAGATAACCATGCTCTTAGTTTGCCAAGATCATCAACTCAAGGTTTCTATGAAAATCCCAATCAGTACTGGGGTGGCGGAAATTCAGCAACTTGGACAGACATTCCAGCCCTTAGCTCTTCCTTAACTAGCCATTTCTTATGA 975 0.4626 MIFSSLPVYLDALNWQRQLQENFGTENYDHHQLLPPLYPKDHHVAGGAAGSIRPGTVADRARQAKVPLPEAGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKNTKKNCSKSAAVNDGRTISNTNGIENTAASRTCTSELICPLLQPDLMASIQNINSRGVGNMGPNSGAEKETHTDPFGRVISLKALCGAGVDQQWCLQQFPSLTSAASYPFQSGCVEAPSALALTSNDPLGILSSSSTTPRVITDQLPPAKFEDNHALSLPRSSTQGFYENPNQYWGGGNSATWTDIPALSSSLTSHFL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00836 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 64 173 IPR045174 GO:0003700|GO:0006355
Pte17g00836 324 Pfam Dof domain, zinc finger 73 127 IPR003851 GO:0003677|GO:0006355
Pte17g00836 324 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Pte17g00836 324 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00836 Pte-Chr17 23231876 23233331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00836 1 129 C2C2-Dof Transcription Factor Family AT2G37590 58.621 2.96e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte17g00836 zf-Dof 4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00836 - - gmx:100816635 280.796