Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00270 ATGGATGTATCTTTAGTGACAGTGACCACTATTGCATTGTCCTTGGTCACAGTGACTTTGCTAATATGGGCATCGAAGATACTAAACAGGTATTGGCTAAGGCCAAAGAAGTTAGAGAGATTGTTGAGACAGCAGCGTTTACGAGGCAGCTCGTACAAGTTTTTGGTAGGGGACCTTAAAGAGAATATGAAGATGATAAGGGAAGCCAAATCTAAACCAATTCAATTTTCAGATGACATTGTACCACGTGTTCTTCCATTCCCCCATCTTAGCATTCAGAAATATGGTAAGAATGGTTTCACATGGCAGGGGACAACACCAATGGTGACCGTCATGGATCCAGAGGGTGTCAAACATATTTTTACCAAGATGCAGGATTTTCCAAAACCAAAATTTCCAATTATCAAGTTGATTGGAACTGGTGTTGCAAATTACGAGGGCGAGAAATGGGCTAAACACAGGAAGATCATTGATCCCATATTCAACATTGAGAAGATAAAGCTTATGCTACCAACATTTTATGGAAGCTGTATAGACATGGTTGGCCAGTTGGAAGAGATGGCATCTCGCAATGGTTCATGTGAATTGGATGTATGGCCCTTTCTACTGAACTTGTCAAGAGATGTTATATCTCGATCTGCTTTTGGAAGCAGCTACGAAGAAGGGAGCAGAATTTTCGATCTCCTAAGAGAGCTGATTGAAATAGTGTTCAAACGAACACAATCCTTTTATTTCCCGTTGTTGAGGTACTTACCGACTGCAACCAACAAGAGAACGAAGGCAATTGTAACAGAAATAGAAGACTTGCTGAAGGGTATTATCAAGAAAAAGGAGAAGGCAATGAAGGATGGCACTGTCTCCAAAGTTGATTTATTAAGCACTCTTTTGGAGTCAAACCAAAAGAATCAAGAAGGGAAGGAAGAAGGTTCAGGAATGAGCATCTCGGATGTGCTTGAGGAGTGTAAGCTATTTTATATTGCTGGACAAGAGACAACCTCGTCTTTGCTTGTCTGGACCATGGTATTGTTAAGTAGATATCCTAATTGGCAAGAACGTGCAAGGCAAGAAGTATTTCAAGTCTTTGGAAACCAAAAGCCAGAGTTCAGAGGGCTTAATAGTCTTAAGATTGTGACAATGATTCTGTATGAGGTTCTTAGATTGTACTCGCCATTGATTTCAACTAGCCGAGTTGTTCATAGTGATACGCAAGTCGGAGAGCTTTCGCTACCTGCAGGAGTAGGAGTGTTTATCCCAATACTTATGATTCATCGTGATCGTGAGATTTGGGGTGATGATGCAAAGGAGTTCAATCCATGGAGGTTTTCAGAAGGAGTTGTGAAGGCAACAAAAGGTCAGAATGCTTTTTTCCCATTCGGATGGGGTCCAAGGATCTGCATGGGGCAAAACTTTGCCTTATTGGAAGCAAAAATGGTGATATCAGTAATTCTGCAGCGCTTCTCCTTTGAACTTTCTCCATCCTATGCTCATGCTCCAGCCTCTCTTTTCTTCCTTTACCCTCAACATGGTGCTCACCTCATTCTACACAAACTGTAA 1554 0.4144 MDVSLVTVTTIALSLVTVTLLIWASKILNRYWLRPKKLERLLRQQRLRGSSYKFLVGDLKENMKMIREAKSKPIQFSDDIVPRVLPFPHLSIQKYGKNGFTWQGTTPMVTVMDPEGVKHIFTKMQDFPKPKFPIIKLIGTGVANYEGEKWAKHRKIIDPIFNIEKIKLMLPTFYGSCIDMVGQLEEMASRNGSCELDVWPFLLNLSRDVISRSAFGSSYEEGSRIFDLLRELIEIVFKRTQSFYFPLLRYLPTATNKRTKAIVTEIEDLLKGIIKKKEKAMKDGTVSKVDLLSTLLESNQKNQEGKEEGSGMSISDVLEECKLFYIAGQETTSSLLVWTMVLLSRYPNWQERARQEVFQVFGNQKPEFRGLNSLKIVTMILYEVLRLYSPLISTSRVVHSDTQVGELSLPAGVGVFIPILMIHRDREIWGDDAKEFNPWRFSEGVVKATKGQNAFFPFGWGPRICMGQNFALLEAKMVISVILQRFSFELSPSYAHAPASLFFLYPQHGAHLILHKL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00270 517 SUPERFAMILY Cytochrome P450 91 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 CDD CYP72 85 513 - -
Pte17g00270 517 Gene3D Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 510 - -
Pte17g00270 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Pte17g00270 517 Pfam Cytochrome P450 93 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 FunFam Cytochrome P450 734A1 32 517 - -
Pte17g00270 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g00270 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00270 Pte-Chr17 3694470 3696721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00270 6 518 Cytochrome P450 AT3G14680 54.175 0.0 590
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00270 17 3694470 3696721 Pte17g00270 17 3694470 3696721 RCT