Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00257 ATGGAGATTACTAATGTCAGCGAGTATGAGCCAATTGCAAAGGCTAAGTTGCCAAAAATGGTGTATGACTATTATGCATCAGGTGCTGAAGACCAATGGACTCTCCAGGAGAACAGAAATGCCTTCTCCAGAATCCTGTTTCGACCACGCATTCTCATAGATGTTAGCAGCGTAGACATGACAACTACTGTCTTGGGCTTCAAGTTATCAATGCCAATCATGATTGCCCCCACTGCCATGCAGAAGATGGCTCATCCCGAAGGGGAGTATGCAACTGCTAGAGCTGCATCAGCAGCTGGAACTATTATGACTTTGTCCTCATGGGCTACTTCAAGTGTTGAAGAGGTTGCTTCAACTGGACCTGGCATCCGCTTTTTCCAGCTCTATGTTTATAAGGATAGGAATGTAGTGGCTCAACTGGTAAGGAGAGCTGAAAGGGCTGGTTTCAAAGCTATCGCTCTTACTGTTGACACCCCAAGGCTTGGTCGCAGAGAAGCTGACATCAAGAACAGGTTCACATTGCCTCCATTTTTGACATTGAAGAACTTTGAAGGTTTGGACCTTGGCAAGATGGACGAAAGCAGTGACTCTGGACTTGCTTCATATGTTGCTGGTCAAATTGACCGTTCCTTGAGCTGGAAGGATGTGCAGTGGCTTCAGACAATCACCAAGCTGCCAATTCTAGTGAAGGGAGTGCTGACTGCTGAAGATACAAGGATAGCCATACAATCTGGGGCAGCAGGAATAATAGTATCCAACCACGGAGCTCGACAACTTGACTATGTCCCTGCCACCATAATGGCTCTAGAAGAAGTTGTCAAAGCTGCACAAGGACGAGTTCCAGTGTTCTTGGATGGTGGTGTACGTCGTGGAACCGACGTCTTCAAGGCATTGGCACTTGGTGCCTCTGGCATATTTATTGGACGTCCAGTAGTGTTTTCTTTGGCTGCTGAAGGAGAAGCTGGTGTCAGAAAAGTGCTGCAGATGCTACGTGATGAGTTTGAGCTGACTATGGCTTTGAGTGGTTGCCGCTCAATCAGTGAAATCACCCGTAACCACATTATGACAGAGTGGGATAGCCCTCGTCCTGTTGCCAGATTATAA 1104 0.471 MEITNVSEYEPIAKAKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSSVDMTTTVLGFKLSMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDESSDSGLASYVAGQIDRSLSWKDVQWLQTITKLPILVKGVLTAEDTRIAIQSGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSISEITRNHIMTEWDSPRPVARL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00257 367 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 359 IPR037396 -
Pte17g00257 367 FunFam peroxisomal (S)-2-hydroxy-acid oxidase GLO1 1 366 - -
Pte17g00257 367 Gene3D Aldolase class I 1 366 IPR013785 -
Pte17g00257 367 ProSitePatterns FMN-dependent alpha-hydroxy acid dehydrogenases active site. 252 258 IPR008259 GO:0016491
Pte17g00257 367 CDD alpha_hydroxyacid_oxid_FMN 7 351 IPR012133 GO:0010181|GO:0016491
Pte17g00257 367 PIRSF Al-hdrx_acd_dh 1 358 IPR012133 GO:0010181|GO:0016491
Pte17g00257 367 PANTHER S -2-HYDROXY-ACID OXIDASE-RELATED 2 360 - -
Pte17g00257 367 SUPERFAMILY FMN-linked oxidoreductases 2 356 - -
Pte17g00257 367 Pfam FMN-dependent dehydrogenase 13 354 IPR000262 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00257 Pte-Chr17 3415943 3419470 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00257 17 3415943 3419470 Pte17g00257 17 3415943 3419470 RCT