Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00249 ATGGATGAAGACAACAACTATCTCTTCCCAACAGATACAGATCTAGACCTGAGCTTTACAAGCTGTGCTTCCACGGCTACTGACCGTACCTTCGCTTCTTCCAGTGCTCGTAGCAGTTTAGCTCGAAGCAGCTTAACCCTTAGTTTCAATGAGTCTAGGCTCTCTACAACTTCAACCACTACCACCACCACCTCTTCAACTGTGTACAGTAGGCCTCACCGTAACTCTGATCCTCATTGGTCAGCCATAAAAGCAGCTACCACTCTTTCCTCTGATGGCAGACTCCATCTCCACCACCTCAAACTTCTTCGCCATCTGGGTACTGGAAACCTTGGCCGAGTCTTCCTTTGCCAACTCAGAGACAATGATCACGCCAACTTTGCTCTCAAAGTAGTAGACAAGGACGCACTGAGCAACAAGAAGCTCTCACATGTACAGACGGAAGCTGAGATTCTCTCCATGCTCGACCATCCTTTTCTTCCAACACTCTATGCTCACTTTGAGGTCTCACATTACACATGTCTCTTGATTGATTACTGTCCCGGAGGAGACCTCCACTATCTCCTTCTCAAACAGCCCGGCAACCGGTTGCCTGTTTCAGCAGTCCGGTTCTTCGCTGCCGAGGTCTTAGTCGCCCTAGAGTACTTACATGCACTTGGGATCCTTTACAGAGATCTAAAGCCAGAAAACGTTTTGCTACGCGAAGATGGTCACATCATGTTATCAGATTTTGATTTGTGTCTGAAAGCTAATGTTAACCCCACGTTTGAGACGAGGGTTCACAGTAGAAAAGCTCATCAGTTTAGACGTAAGAAGACAAACGGTAAGGTGAAGATGGTGAAGGAGACAGTCGCAGCGGAGTTCGTTGCGGAGCCCACGGCGGCTTTTTCAAGATCATGTGTGGGAACACATGAGTACTTGGCGCCGGAACTTGTCTCCGGCAATGGTCATGGTAATGGTGTAGATTGGTGGGCGTTCGGTGTGTTTATATATGAATTGTTGTACGGAATGACGCCGTTTAAAGGAGGAAGTAAAGAGAGTACATTGCGAAACATAGCATCAACAAGAGATGTGAAATTCAGCATGGTAGATAGAGAGGAAGAAGGCATGGATCAAGCTAGGGATTTGATAGAGAAGCTGTTGATGAAAGACCCAACGAGAAGACTTGGGAGCACGAGGGGTGCAACAGAAATCAAGAGACATCCATTTTTTAATGGGATCAAGTGGCCATTGATTCGAACCTATAGACCGCCAGAACAGGTTCGCGGGCTCTTGAGAAGAGGGAAGACGCATGTTGTGAGCCATGTGAGTTCAGGGGTGTCACCAAAGAGAAGGCGATGTTGGTGGAACAGACTTGGTTACTTCATGAAAAATAAAGGGTATAGTTCGAATCATAGCAATGGTAATTACTATCATTATGTTAATAATCACAAGGTTAGCAAATGTTCATGA 1452 0.4628 MDEDNNYLFPTDTDLDLSFTSCASTATDRTFASSSARSSLARSSLTLSFNESRLSTTSTTTTTTSSTVYSRPHRNSDPHWSAIKAATTLSSDGRLHLHHLKLLRHLGTGNLGRVFLCQLRDNDHANFALKVVDKDALSNKKLSHVQTEAEILSMLDHPFLPTLYAHFEVSHYTCLLIDYCPGGDLHYLLLKQPGNRLPVSAVRFFAAEVLVALEYLHALGILYRDLKPENVLLREDGHIMLSDFDLCLKANVNPTFETRVHSRKAHQFRRKKTNGKVKMVKETVAAEFVAEPTAAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGMTPFKGGSKESTLRNIASTRDVKFSMVDREEEGMDQARDLIEKLLMKDPTRRLGSTRGATEIKRHPFFNGIKWPLIRTYRPPEQVRGLLRRGKTHVVSHVSSGVSPKRRRCWWNRLGYFMKNKGYSSNHSNGNYYHYVNNHKVSKCS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00249 483 FunFam Serine/threonine-protein kinase OXI1 295 422 - -
Pte17g00249 483 ProSiteProfiles Protein kinase domain profile. 100 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00249 483 Gene3D Transferase(Phosphotransferase) domain 1 184 252 - -
Pte17g00249 483 FunFam Serine/Threonine Kinase 98 184 - -
Pte17g00249 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Pte17g00249 483 FunFam Serine/threonine-protein kinase OXI1 184 252 - -
Pte17g00249 483 PANTHER FLIPPASE KINASE 1-RELATED 42 422 - -
Pte17g00249 483 SUPERFAMILY Protein kinase-like (PK-like) 76 420 IPR011009 -
Pte17g00249 483 Pfam Protein kinase domain 102 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00249 483 CDD STKc_phototropin_like 107 419 - -
Pte17g00249 483 SMART serkin_6 100 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00249 483 Coils Coil 363 383 - -
Pte17g00249 483 Gene3D Transferase(Phosphotransferase) domain 1 273 415 - -
Pte17g00249 483 Gene3D Phosphorylase Kinase; domain 1 100 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00249 Pte-Chr17 3349254 3350947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00249 3 481 AGC Kinase Gene Family AT3G14370 63.895 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte17g00249 Pkinase 4.2e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00249 17 3349254 3350947 Pte17g00249 17 3349254 3350947 RCT