Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00225 ATGAATCTGTACAATACCCAGATGGGATTCTCGTTGCCGTTATCTGGGACTACGACTGAAACGATGCTTCCGGCCTACAATTCATGGATCGTCGACTCGGTTCCCGTGAAATCAGAGAGTGGCTTGACGTTCAACCTTCCTGTACAAAGAAAGCGTAATAGGGATTCACTCAGACCCTTCTCGACTTACAAGTCAACAACCCCACAACCCCAGAAAAATTCCACTTCTTTTTCGTTTCTTGGTGAAGATATCTCCCTCCAGATCCAACAACAACAACTGGATGTCGATTGCCTTATAGCCCAACATATGGCGAAGGTGAGGATGGAGGTTGAAGAGAAGAGGAAGAGACAAGCGAGGCGGATGCTGGAGGCTATAGAATTGGGTGTGATGAAGAAACTGAAAACGAAGGACGAAGAGATAGACAAAATTGGAGAGCTGAATTGGGCGCTTGAAGAGCGAGTCAAGTCTCTGTGTATAGAGAATCAGATATGGAGGGATTTGGCTCAAACCCATGAAGCCACAGCGCATGCCCTCCGTACAAATCTTGAACAAGTGTTGGCACAGGTCAAGGATGACCGCACCCGTGGAATGGGATTCGAAGATGAGCTTCCAATAGCAACAGCGGCACTCATGGATGATGCCCAATCGTGCTGCGGAAGCAATGATGGTGTTGCCGGGTGTAGAGGAGAAGAGAGAGAAGTCATGGGGGAGATGCGCATATTAGCAGGTGGGGTGCATGGTAAGTGTGAAGAAGACGAAGTCACAATCAAGCGTCACTGCAGCCATGGCAGTAGGCTTTGCAGAAGCTGCGGGAAGGAGGAGTGTTGTGTGCTGATTTTGCCTTGCAGGCATCTCTGCCTGTGTACTGTTTGTGGGTCTACCTTACACACTTGTCCCATCTGTAAATCCATCAAGAATGCTAGTGTCCATGTTAACTTGTCTTAG 945 0.4836 MNLYNTQMGFSLPLSGTTTETMLPAYNSWIVDSVPVKSESGLTFNLPVQRKRNRDSLRPFSTYKSTTPQPQKNSTSFSFLGEDISLQIQQQQLDVDCLIAQHMAKVRMEVEEKRKRQARRMLEAIELGVMKKLKTKDEEIDKIGELNWALEERVKSLCIENQIWRDLAQTHEATAHALRTNLEQVLAQVKDDRTRGMGFEDELPIATAALMDDAQSCCGSNDGVAGCRGEEREVMGEMRILAGGVHGKCEEDEVTIKRHCSHGSRLCRSCGKEECCVLILPCRHLCLCTVCGSTLHTCPICKSIKNASVHVNLS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00225 314 MobiDBLite consensus disorder prediction 59 74 - -
Pte17g00225 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 313 IPR013083 -
Pte17g00225 314 MobiDBLite consensus disorder prediction 55 74 - -
Pte17g00225 314 Pfam Zinc finger, C3HC4 type (RING finger) 265 303 - -
Pte17g00225 314 ProSiteProfiles Zinc finger RING-type profile. 267 302 IPR001841 -
Pte17g00225 314 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 41 311 IPR017066 -
Pte17g00225 314 CDD mRING-HC-C3HC5_CGRF1-like 265 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00225 Pte-Chr17 2817775 2819346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00225 250 303 Miscellaneous Gene Families AT4G39050 33.333 2.07e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00225 17 2817775 2819346 Pte17g00225 17 2817775 2819346 RCT