Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01590 ATGGCTGTGGTGGAGTTGTTCACAAAATCTGAGCAAGGCCAAGGTGGCGGTCGTGGTGGCCAATGCGACGGAACAAGCAAAGCAAGGTCGTCGAGGTTGATGGCCTTACAATTGCAAATGACTTGGCAGCCGAGTTTACTCAGTGCTAAACGCAAAACGGGTCCTCCTTTAGGTCTCAAAAACCTCGGCAATACTTGTTACCTCAACAGCGTTCTTCAATGTCTTACCTACACTCCTCCTCTCGCTAATTTCTGTCTTCGAAACCAGCATTCTTCACTCTGTGATTCAGTGCGTGATTGTCCGTTTTGTTTGTTGGAGAAGAGAATTGTGCGTTCCTTAAGGTATGATGGTGTGTTAGATGTACCATTGAAGTTTCAGAGCAGTCTTAAGATTTTTGCAGAACACTTTCCGGGCGGTCGGCAAGAGGATGCTCATGAGTTCTTAAGGTATGTGATTGATGCGTGCCACAATACTTGTCTCCGGTTGAAGAAGCTCAAGATAAAGGGTGCTGTGGAGGTTAGCAATGGAAGCAGCAGTGGGGGAGTTGGGGGAAGTACTACTACGGTTGTGGAGGAGATTTTTGGGGGAGCTTTGCAGAGCCAGGTGAAATGTCTATCTTGTGGCTATGAGTCCAATAAGGTTGATGAGATAATGGATATAAGTCTTGATGTTTTGCATAGTAATTCGCTTGAAGAGGCCATGCAGAAGTTTTTCCAGCCTCAGGTTTTGGATGGCAACAATAAGTACAAGTGTGAGAAATGCAAGAAGTTGGTAGCAGCAAGGAAGCAGATGTCTATATTACAGGCGCCTAATATCCTTGTCATTCAACTCAAGAGATTTGAGGGCATATTTGGTGGTAAAATTGATAAGCCTGTTGCATTTGAAGAGGTGTTGGTCCTTTCCAATTTCATGTGCAAAGAAAGCCAGGATCCACAACCAGAGTATAAGCTCTTTGGGACAATTGTACACTCAGGCTACTCACCGGAGTCTGGCCATTATTATGCTTATATAAAGGATGCTACTGGTTCTTGGTATTGTTGCAATGATTCAATGGTCAAGCACACTCTCTTTCAGACAGTCTTGTCAGAGAAGGTTTATATTCTATTCTTTACCCGAGTAAACAAGAGGTTAATATCTGTCAGTCCTTCTCTTGCTTCGAAGGGAGAAAAATCTTACACTTGTAATGGCGATAAGTTTCATGGATCCCCAATGGATGATCTAGCAATGAGAAATGTGCATTCAAAAGGAGTTGTTGAAAAACCTTATTTATCAGATATTCCAGACATGGCTAAAAATGAAAAAGATCCTTCATGCCCTAAAGTGAAGTTTGATTTTGCTGGGAACTCGATTTCCAGAAAAGGTTCAGTTATTGTAAATGGTAGAGTTGATACTGTCAAAGGGCAATCGTTGGCAACAACATCTTTGAGAAATTCATCAACTATGAGAGACAAAGGGAAGGATCAGACATCACTGGTGAAGGGGAATGGTTTCCATCAAAATGGAAAAGCAAAAGTCGATGCATTTGGTGAAAAGCATTTGGCAATGGAAAATGGAAATGGTTATGCCGAGTACAATCATGTTAATGGCGTAAAATCGGACGGGAGGGAAGTATCTAGTTCAAGAAATGAGTTGATGACAGGTGGAGCATGTAACCATCATAAATTAGAGACCAATGGTTGCAGGAGCGAGAGCAAGGCCAATATGCCCAGAAATAAGAGAAAAGTTGAGGAGAATACATCAATTTTGCTTGCAGAGGATAGTCTCTCTCGGAGAGAAGTCGAAAAATTGAAAGATTTACTCAGAAAAGAAGCTTATTCAGTTTTGCAATCATGTGGTTGGTCGGATGAGGTTTATAAATTCATGTGGTCAAGAAAAAGATTTTGCACACGTGAAGGAGCAAAGGAATCGATCAATGACGATTTGAAGAAGAAATTGATACAAGATGCAAAAGGAACTTTCAATTCCCAAATACCTGAGTCGTTGAAAGAGGACCTAATTGGGCGTCTCCGAACATTTAAACAAGAGAATAAACAATTTTCAGGAAATTGA 2049 0.4153 MAVVELFTKSEQGQGGGRGGQCDGTSKARSSRLMALQLQMTWQPSLLSAKRKTGPPLGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQHSSLCDSVRDCPFCLLEKRIVRSLRYDGVLDVPLKFQSSLKIFAEHFPGGRQEDAHEFLRYVIDACHNTCLRLKKLKIKGAVEVSNGSSSGGVGGSTTTVVEEIFGGALQSQVKCLSCGYESNKVDEIMDISLDVLHSNSLEEAMQKFFQPQVLDGNNKYKCEKCKKLVAARKQMSILQAPNILVIQLKRFEGIFGGKIDKPVAFEEVLVLSNFMCKESQDPQPEYKLFGTIVHSGYSPESGHYYAYIKDATGSWYCCNDSMVKHTLFQTVLSEKVYILFFTRVNKRLISVSPSLASKGEKSYTCNGDKFHGSPMDDLAMRNVHSKGVVEKPYLSDIPDMAKNEKDPSCPKVKFDFAGNSISRKGSVIVNGRVDTVKGQSLATTSLRNSSTMRDKGKDQTSLVKGNGFHQNGKAKVDAFGEKHLAMENGNGYAEYNHVNGVKSDGREVSSSRNELMTGGACNHHKLETNGCRSESKANMPRNKRKVEENTSILLAEDSLSRREVEKLKDLLRKEAYSVLQSCGWSDEVYKFMWSRKRFCTREGAKESINDDLKKKLIQDAKGTFNSQIPESLKEDLIGRLRTFKQENKQFSGN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01590 682 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 42 375 - -
Pte15g01590 682 Pfam Ubiquitin carboxyl-terminal hydrolase 58 370 IPR001394 GO:0004843|GO:0016579
Pte15g01590 682 CDD Peptidase_C19E 56 370 - -
Pte15g01590 682 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 315 333 IPR018200 GO:0004843|GO:0006511
Pte15g01590 682 Gene3D Cysteine proteinases 43 373 - -
Pte15g01590 682 MobiDBLite consensus disorder prediction 476 498 - -
Pte15g01590 682 SUPERFAMILY Cysteine proteinases 50 372 IPR038765 -
Pte15g01590 682 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 57 373 IPR028889 -
Pte15g01590 682 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 58 73 IPR018200 GO:0004843|GO:0006511
Pte15g01590 682 FunFam Ubiquitin carboxyl-terminal hydrolase 25 51 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01590 Pte-Chr15 13515289 13521151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01590 56 479 Miscellaneous Gene Families AT2G24640 33.102 2.03e-59 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01590 15 13515289 13521151 Pte15g01590 15 13515289 13521151 RCT