Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01555 ATGGCTACAGCATCCGCACCCACAGCTTTCTCTTTACTCCAACCCACCAACACAGCCTCATCCAGCGCTTCCCGAACCCGTTCATGCCTTCACATCTCACCAGTTTCTTCGTCCTCCGCTTTGCGTTCTAGGTTCGTTGGCTTTCGCAGTCTTGGATTTACTGCAGCTGACCCTTTAATGGCTGGCATTGTGTCCAGGGTTCAACCGTTAACACCTGTCAGTAAACATATTAGAGGTGCGATATGCGCGGCAAAGAAGAGTGTCGGGGACTTGACTGATGCTGACTTGAAGGGAAAGAAGGTCTTTGTGCGGGCTGATTTGAATGTGCCTTTGGATGAGAATCAGAATATCACTGATGACACTAGAATCAGGGCTGCTGTCCCAACAATCAAGCATTTAATTGAGAATGGTGCTAAAGTCATTCTCTCCAGCCATTTGGGTAGACCAAAGGGTGTCACTCCGAAATACAGCCTGGCACCTCTTGTTCCTCGGCTATCCGAACTCCTTGGCATTCAGGTTGTAAAGGCTGATGACTGCATTGGTCCAGAGGTAGAGAAGTCCGTTAATTCACTTCCTGATGGAGGTGTTCTTCTTCTCGAGAATGTAAGATTTTACAAGGAGGAAGAGAAGAATGATCCCGAGTTCGCAAAGAAGCTTGCCTCTTTGGCTGATCTGTATGTGAATGACGCTTTTGGCACAGCACATAGGGCCCATGCCTCCACTGAAGGAGTGACTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTTTGCAGAAGGAACTTGACTATCTTGTTGGGGCAGTGTCGAGCCCAAAAAGGCCATTTGCTGCCATAGTTGGTGGTTCAAAGGTTTCCTCAAAAATTGGTGTGATCGAGTCACTTTTAGAGAAGGTTGATATTCTACTTCTTGGCGGTGGTATGATTTTTACATTTTACAAGGCACAAGGCCTCTCGGTTGGTTCTTCCCTTGTTGAGGAGGATAAATTAGGCCTTGCTACCTCTTTACTAGCAAAAGCAAAGGCAAAAGGAGTAAATCTCTTGCTACCTTCTGATGTGGTCATTGCAGACAAGTTTGCTCCTGATGCAAACAGCAAGATCGTGCCTGCATCTGCTATCCCTGATGGATGGATGGGATTGGATATTGGACCAGAGTCTGTCAAGTTATTCAACGATACTTTGGAAACTACACAAACTGTTATATGGAATGGACCAATGGGAGTGTTTGAGTTTGACAAATTTGCTGTCGGAACAGAGGCTGTTGCTAAGAAGCTAGCAGATCTCAGTGGAAAGGGAGTGACGACAATAATTGGAGGCGGAGATTCCGTTGCAGCAGTGGAAAAAGTTGGTGTTGCTAGTGTGATGAGCCACATTTCAACCGGTGGTGGTGCAAGTTTGGAATTGTTGGAAGGCAAAGAGCTTCCTGGTGTTATTGCTCTTGATGAAGCCACCCCAGTCGCCGTGTAA 1464 0.4672 MATASAPTAFSLLQPTNTASSSASRTRSCLHISPVSSSSALRSRFVGFRSLGFTAADPLMAGIVSRVQPLTPVSKHIRGAICAAKKSVGDLTDADLKGKKVFVRADLNVPLDENQNITDDTRIRAAVPTIKHLIENGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKADDCIGPEVEKSVNSLPDGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLGLATSLLAKAKAKGVNLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPESVKLFNDTLETTQTVIWNGPMGVFEFDKFAVGTEAVAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVIALDEATPVAV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01555 487 PANTHER PHOSPHOGLYCERATE KINASE 85 483 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 Gene3D - 268 481 IPR015824 GO:0004618|GO:0006096
Pte15g01555 487 Pfam Phosphoglycerate kinase 92 471 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 SUPERFAMILY Phosphoglycerate kinase 90 481 IPR036043 GO:0004618|GO:0006096
Pte15g01555 487 CDD Phosphoglycerate_kinase 91 481 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 FunFam Phosphoglycerate kinase 92 265 - -
Pte15g01555 487 Hamap Phosphoglycerate kinase [pgk]. 90 481 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 FunFam Phosphoglycerate kinase 270 457 - -
Pte15g01555 487 ProSitePatterns Phosphoglycerate kinase signature. 100 110 IPR015911 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 457 474 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 276 295 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 434 445 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 253 275 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 117 139 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 194 209 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 95 111 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 222 244 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 PRINTS Phosphoglycerate kinase family signature 398 423 IPR001576 GO:0004618|GO:0006096
Pte15g01555 487 Gene3D - 89 265 IPR015824 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01555 Pte-Chr15 12951314 12954512 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01555 15 12951314 12954512 Pte15g01555 15 12951314 12954512 RCT