Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01542 ATGGAGGAAAGCAGAGAAGGATCCCATGATTCAGCCATGGAGAATAACAGAGATGAGCCCCTTTTGCCACCAAGGGATGGCTCCTCTTGGAGACTCAACTTGAAAGAGTTCCACCTACCCGGGGACAACGATGACAAGCATCACTCTTTCGCATTCAATCGTCTTCTTCGCAAACCACGGAGAAAGCGTAAGGTTGCAGAATACTACAAACAACAACAAAGGCTCTTGGATGGATTTAACGAGATGGAGACTATGCATGAAACCGGGTGTATGCCCGGAGCCCTCACCGAGGATGAACTACAGCAGTTGGCCAAGAGCGAGAGGCTAGCAGTTCATGTGTCAAACATAGCTAACATGGTGCTCTTTGCAGCAAAGGTTTATGCGTCTATAGAGAGTAGATCATTGTCTGTGATTGCCTCAACTTTGGATTCTCTATTGGACCTGTTGTCCGGGTTTATTCTATGGTTTACTTCCCATGCCATGAAAAAACCAAACCGTTATCACTATCCAATTGGGAAAAAGCGAATGCAGCCTGTGGGAATCATCGTCTTTGCATCAGTTATGGCAACTTTAGGCTTGCAGATATTACTTGAATCTGGGAGGCAACTTGCTTCGCAGACTAAGCCAAAGATGTCAGCCTGGGAGTTGCACTGGATGATTGGGATTATGCTATCTGTTACAGCGGTGAAGTTTGCTCTCATGGTATACTGCCGAAGATTTAAAAATGAAATTGTCCGCGCCTATGCACAAGATCATTTTTTCGATGTTATTACCAATTCAGTTGGTTTAGCTGCAGCTGTCTTGGCTATCAAATTCAAATGGTGGATGGATCCTACTGGAGCAATTATTATAGCTCTCTACACCATTAATACATGGGCAAGGACAGTGATTGAGAACGTCTGGTCACTGATTGGAAGAGCAGCCCCACCTGATTTCCTGACAAAGTTAACCTTCCTGATATGGAACCATCATGAAGACATCAAGCACATAGACACGGTCAGAGCATACACATTTGGTGCCTATTACTTTGTGGAGGTGGATATTGTCTTGCCAGAAGATATGCTTCTAAATCAAGCGCACAACATTGGTGAGACACTGCAAGAGAAGCTTGAGCAACTTCCTGAAGTTGAGCGTGCCTTTGTTCATATAGATTTTGAATTCACTCACAAGCCTGAGCACAAGACCATGGTATGA 1194 0.4456 MEESREGSHDSAMENNRDEPLLPPRDGSSWRLNLKEFHLPGDNDDKHHSFAFNRLLRKPRRKRKVAEYYKQQQRLLDGFNEMETMHETGCMPGALTEDELQQLAKSERLAVHVSNIANMVLFAAKVYASIESRSLSVIASTLDSLLDLLSGFILWFTSHAMKKPNRYHYPIGKKRMQPVGIIVFASVMATLGLQILLESGRQLASQTKPKMSAWELHWMIGIMLSVTAVKFALMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAIKFKWWMDPTGAIIIALYTINTWARTVIENVWSLIGRAAPPDFLTKLTFLIWNHHEDIKHIDTVRAYTFGAYYFVEVDIVLPEDMLLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHKPEHKTMV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01542 397 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 25 394 - -
Pte15g01542 397 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g01542 397 FunFam Metal tolerance protein 4 311 397 - -
Pte15g01542 397 Pfam Dimerisation domain of Zinc Transporter 314 384 IPR027470 -
Pte15g01542 397 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 384 IPR036837 -
Pte15g01542 397 SUPERFAMILY Cation efflux protein transmembrane domain-like 106 305 IPR027469 -
Pte15g01542 397 Gene3D Cation efflux protein, cytoplasmic domain 311 385 IPR036837 -
Pte15g01542 397 NCBIfam cation diffusion facilitator family transporter 111 384 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte15g01542 397 MobiDBLite consensus disorder prediction 1 27 - -
Pte15g01542 397 Gene3D Cation efflux protein transmembrane domain 108 303 IPR027469 -
Pte15g01542 397 FunFam Metal tolerance protein 11 110 303 - -
Pte15g01542 397 Pfam Cation efflux family 113 303 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01542 Pte-Chr15 12755206 12758235 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01542 15 12755206 12758235 Pte15g01542 15 12755206 12758235 RCT