Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01191 ATGGCTGATCGAGCTCGGCAAGCCAATATTCCACAGCCTGAGGCTGGTCTGAAGTGTCCAAGGTGTGAGTCCACTAACACTAAGTTTTGTTATTTCAACAACTACAGCCTCTCGCAGCCACGCCACTTCTGCAAGACATGCCGGAGGTACTGGACAAGAGGAGGTGCTCTCAGAAACGTCCAGGTCGGAGGAGGCAGGAGAAACAAGAAAAACAAAAGGAATCGTTCCAAATCTCCAGCTGCCATGGATAGACAGGCCATCTCCAATCACGATGGCCAGATCAATATTGTCTCACGCAGCTATGCAACAAGTGATTTGACTATGAGTCATCAGTTGCCGCAACCATCTCCGTTGCATCTGATGACATCTTTACGAAATATCAATAGCCGCTATGGAGTTGGGAACTTAGGGCTCAACTTGGAAGCTCAGATCCCAGCACATTCTGATCCCTCAGGGTTTCATATGGGAAATACTTCGAGCACAGTGGACCAACAATGGCGTTTTCCTTTCTTGACTTCTACGACTTTCGACTCACCTACTTGCATTGGTACTTGCACATTTCAAAGCCATCAGAGTGTTGAAACACCGGCTGCTTTGGCTTTAATTGGAGATAGTGAAAGCCCACTGGGGTCTTTGACATTAAGTTCTACTGTTACCACTGCAACTAGGGCAATGACTCAGTTTCCATCAGTAAACTACGAAGACACACAAGCGCTTAATTTGGCAAAATCATCGACTCCATCTTTCACAACAAATGGTAATCAGTACTGGGGTGGTGGAAACCCATGGACAGACATCTCAGCTCTCAACTCTTCGTCAAGTAGCCATCTCTTGTGA 837 0.4671 MADRARQANIPQPEAGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVQVGGGRRNKKNKRNRSKSPAAMDRQAISNHDGQINIVSRSYATSDLTMSHQLPQPSPLHLMTSLRNINSRYGVGNLGLNLEAQIPAHSDPSGFHMGNTSSTVDQQWRFPFLTSTTFDSPTCIGTCTFQSHQSVETPAALALIGDSESPLGSLTLSSTVTTATRAMTQFPSVNYEDTQALNLAKSSTPSFTTNGNQYWGGGNPWTDISALNSSSSSHLL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01191 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 183 IPR045174 GO:0003700|GO:0006355
Pte15g01191 278 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
Pte15g01191 278 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
Pte15g01191 278 Pfam Dof domain, zinc finger 17 71 IPR003851 GO:0003677|GO:0006355
Pte15g01191 278 MobiDBLite consensus disorder prediction 61 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01191 Pte-Chr15 9065678 9067544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01191 1 72 C2C2-Dof Transcription Factor Family AT2G37590 84.932 3.16e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte15g01191 zf-Dof 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01191 - - pvu:PHAVU_011G064800g 207.994