Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte15g01144 | ATGGATCCTTCAAACGGACTACATCAGGAAATGTCTAGCCATTCGCTAGAAACCATGCTGGTTTGTTCAAAAGCTCATCAGGAGAGAAGGCCAAAGCCTCAACCGGAACAAGCTTTAAAATGCCCTAGATGCGATTCCACCAACACTAAATTCTGCTACTATAACAATTACAGCCTCTCTCAGCCAAGATACTTCTGCAAGTCTTGCAGGAGGTACTGGACCAAAGGAGGAACACTGAGGAACGTGCCAGTTGGTGGAGGCTGCAGGAAGAACAAGAGATCATCATTATCATCCAAGAGGACCCAAGATCAACCACACACGCCAAATCCCAACCTACACAATGGCATCCCTGCATTGTCTTACGATTCCAGTGACCTCACACTTGCTATAGCTAGGCTCCAAAACCAGTCAAGTGGCCAGCTGAGTTATGGTGAACACGACCTGTCTATTCTAGGAAACCCCTCCACAGCTCACTGTGACATTCTTGGCGATCATGGTTTCATGGACGTACATAGGAGTGGATTCCTAGAGACTCAGAATAATCTCCAGAGCATTTACTATGGATATGGAAATGGAGAAATGGAGAATGGTAATCAAGAGATGATGGTTCCTCCGATGAGTAATGCAACCAGTCAAGCAGTCACAGTGAGCACAGTGAAGCAAGAGTTGTGCAGTGCAAGAGAGCAGCAAAATGACAACAGGGTCTTATGGGGTTTCCCGTGGCAATTTAGTGGTGAAGGAAATATTGCTGATTTTGATCAAGGAAGAGGCAGCTGGAATAGTTTCAATTCTTCTTGGCATGGTGTTCTCAACAGTCCTCTAATGTAA | 828 | 0.4553 | MDPSNGLHQEMSSHSLETMLVCSKAHQERRPKPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSLSSKRTQDQPHTPNPNLHNGIPALSYDSSDLTLAIARLQNQSSGQLSYGEHDLSILGNPSTAHCDILGDHGFMDVHRSGFLETQNNLQSIYYGYGNGEMENGNQEMMVPPMSNATSQAVTVSTVKQELCSAREQQNDNRVLWGFPWQFSGEGNIADFDQGRGSWNSFNSSWHGVLNSPLM* | 276 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte15g01144 | 275 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 24 | 225 | IPR045174 | GO:0003700|GO:0006355 | |
Pte15g01144 | 275 | MobiDBLite | consensus disorder prediction | 84 | 118 | - | - | |
Pte15g01144 | 275 | MobiDBLite | consensus disorder prediction | 98 | 118 | - | - | |
Pte15g01144 | 275 | Pfam | Dof domain, zinc finger | 37 | 93 | IPR003851 | GO:0003677|GO:0006355 | |
Pte15g01144 | 275 | ProSitePatterns | Zinc finger Dof-type signature. | 41 | 77 | IPR003851 | GO:0003677|GO:0006355 | |
Pte15g01144 | 275 | ProSiteProfiles | Zinc finger Dof-type profile. | 39 | 93 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte15g01144 | Pte-Chr15 | 8651355 | 8653501 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte15g01144 | 1 | 276 | C2C2-Dof Transcription Factor Family | AT2G28510 | 43.087 | 8.64e-54 | 174 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Pte15g01144 | zf-Dof | 5.3e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte15g01144 | - | - | gmx:100799737 | 374.785 |