Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00526 ATGGAGCCTGCATTCTCTACCCACTCAAACCCTCTTCTTTGCTCAACCAATGGTGATGAACACGAAGCTCGATTCAACATTCCAAGGAAGACGATGCCAAAGAAGCAGATCTCAACGAAAGCAGCTGTGAACATAGTAAAGGATAAGTTGAAGCAGGACGCCACCCCCAAGCTGAACCTAGCAACCTTTGTCACATCAGCTATGGAACCAGAATGTGAGGAGATTATGTTAGAGTCCATGAACAAGAACTGTGCAAATGCTTTTGAATACCCTGCAACTGCTGAAATGGAGAGAAGTTGTGTAAACATGCTTACAAATTTATATCACGCTCCACTGGAAGAATCAGATGGAGCAGTTGGGGTTGCAACTATAGGTTCATCAGAGGGAGCTATGCTTGCTAGCCTTGCATTCAAAACAAAATGGCAGAACAGCCGGAAAGCTAAGGGTGAACTTATTAGCAACCCCAACATTGTGATTGGATCCAACTTGCAGGTATGTTGGAAAAAATTTGCAAGGTACTTTGAGGTGGACTTGAAGGAAGTAAAAGTGAGAGAAGGGTATTATGTGATGGATTCATACAAGGCAGTAGAAATGGTAGACGACCATACAATCTGTGTGGTTGGTATCTTGGGGTCAACCTATAATGGAGAGTTTGAGGATGTCAAGCTTTTGAATGAACTCTTGGAACGGAACGTTCCAATTCATATTGATGCTGCTAGTGGTGGATTTATCGCACCATTTTGTGAGCCAGAGCTAGAGTGGGACTTCAGGCTTCCACTGGTGAAGAGCATCAATGTGAGTGGTCATAAGTATGGACTAGTCTATCTTGGGGTTGGATGGACCATTTGGAGAACCAAAGAAGACTTGCCAGAAGATTTGATCTTCCATTACAGTCTCTTCAGTGCTGAGCAGCCAACCATCACCCTCAATATGTCCAAAAGTTCAAGTCAAATCATTGCTCAATATTATCAAATGATACGCTTAGGTCATGAGGGTTACAGGAATTTGATGCAGACTTGCAGGCAGAATGCTAAAGTTATTACAGAAGGGCTTCATAAGATTGGGGGGTTGAACATTATATCAAAGGATACTGGGATTCCAATGGTGGTGTTTAATCTCAAAGACAAAACCTCCTCCAATGAATATGAACTATGTGACAAGTTGTGTCAGTTTGGTTGGATTATACGAGCTTATCCTATGCCTCCTGGTGCTGAGCATGTCACTGCTGTTCGCATAGTTGTAAGGCCAGACCTGTCTCGTGCACTCGTTAAGAAACTCATGCTCGACATGTGGCTAAGTTGTGAGTCAATTCAAGAACATTGTGACTACGAAGTAATTTCATAA 1344 0.4278 MEPAFSTHSNPLLCSTNGDEHEARFNIPRKTMPKKQISTKAAVNIVKDKLKQDATPKLNLATFVTSAMEPECEEIMLESMNKNCANAFEYPATAEMERSCVNMLTNLYHAPLEESDGAVGVATIGSSEGAMLASLAFKTKWQNSRKAKGELISNPNIVIGSNLQVCWKKFARYFEVDLKEVKVREGYYVMDSYKAVEMVDDHTICVVGILGSTYNGEFEDVKLLNELLERNVPIHIDAASGGFIAPFCEPELEWDFRLPLVKSINVSGHKYGLVYLGVGWTIWRTKEDLPEDLIFHYSLFSAEQPTITLNMSKSSSQIIAQYYQMIRLGHEGYRNLMQTCRQNAKVITEGLHKIGGLNIISKDTGIPMVVFNLKDKTSSNEYELCDKLCQFGWIIRAYPMPPGAEHVTAVRIVVRPDLSRALVKKLMLDMWLSCESIQEHCDYEVIS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00526 447 Gene3D - 15 65 - -
Pte14g00526 447 Pfam Pyridoxal-dependent decarboxylase conserved domain 51 374 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte14g00526 447 Gene3D - 355 441 - -
Pte14g00526 447 Gene3D - 66 353 IPR015421 GO:0003824
Pte14g00526 447 SUPERFAMILY PLP-dependent transferases 22 429 IPR015424 -
Pte14g00526 447 PANTHER GLUTAMATE DECARBOXYLASE 22 439 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte14g00526 447 NCBIfam glutamate decarboxylase 25 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00526 Pte-Chr14 25086754 25091305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00526 24 430 Calmodulin-binding Proteins AT5G17330 61.836 0.0 561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00526 14 25086754 25091305 Pte14g00526 14 25086754 25091305 RCT